RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 SHANK2-AS3Q9BTD1 123 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 TMPRSS5Q9H3S3 457 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 DISC1C4P0D8 188 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 PRSS46E5RG02 174 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 PITX3O75364 302 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 NXPH4O95158 308 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-203ENST00000397378 FAAP20Q6NZ36 180 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 LYZL2Q7Z4W2 148 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 TMED4Q7Z7H5 227 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 PRR13Q9NZ81 148 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 LRP2P98164 4655 aa6.38□□□□□ -1.39
NEDD9-203ENST00000397378 TRAV9-2A0A087WT02 112 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 PIGBOS1A0A0B4J2F0 54 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 PCP4L1A6NKN8 68 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 F8W036 122 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 K7EP13 123 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 PLP1P60201 277 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 RAP2BP61225 183 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 NCS1P62166 190 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 MRPS10P82664 201 aaKnown RBP6.37□□□□□ -1.39
NEDD9-203ENST00000397378 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 GFI1BQ5VTD9 330 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 Q6ZTI0 123 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 RPUSD4Q96CM3 377 aaKnown RBP6.37□□□□□ -1.39
NEDD9-203ENST00000397378 HIGD1AQ9Y241 93 aa6.37□□□□□ -1.39
NEDD9-203ENST00000397378 MED6O75586 246 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 AKAIN1P0CW23 69 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 IAPPP10997 89 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 CXCL2P19875 107 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 RPP30P78346 268 aaKnown RBP6.36□□□□□ -1.39
NEDD9-203ENST00000397378 SRPXP78539 464 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 LBHQ53QV2 105 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-203ENST00000397378 ACOT7LQ6ZUV0 252 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 LRRC20Q8TCA0 184 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 AP3S1Q92572 193 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 CIB3Q96Q77 187 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-203ENST00000397378 PRRT1Q99946 306 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 PYGO2Q9BRQ0 406 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 ICOSQ9Y6W8 199 aa6.36□□□□□ -1.39
NEDD9-203ENST00000397378 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 TRGV2A0A075B6R0 118 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 DUXBA0A1W2PPF3 345 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 MRPS12O15235 138 aaKnown RBP6.35□□□□□ -1.39
NEDD9-203ENST00000397378 HYPMO75409 117 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 ZNF324O75467 553 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-203ENST00000397378 IL5P05113 134 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 SLC25A6P12236 298 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 ANXA3P12429 323 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 AKR1C1Q04828 323 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 LCN15Q6UWW0 184 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 CYP2G1PQ6ZSU1 146 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 OR51S1Q8NGJ8 323 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-203ENST00000397378 SCGB3A2Q96PL1 93 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 ODF3Q96PU9 254 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 LINC00467Q9BRT7 94 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 FUNDC2Q9BWH2 189 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-203ENST00000397378 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-203ENST00000397378 MSRB1Q9NZV6 116 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 RNF24Q9Y225 148 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 LY96Q9Y6Y9 160 aa6.35□□□□□ -1.39
NEDD9-203ENST00000397378 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 PAX4O43316 350 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 SELENOTP62341 195 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 FLI1Q01543 452 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-203ENST00000397378 C21orf62-AS1Q17RA5 79 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 LYPD5Q6UWN5 251 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 CCDC190Q86UF4 302 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 SMIM4Q8WVI0 70 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 RSL24D1Q9UHA3 163 aaKnown RBP6.34□□□□□ -1.39
NEDD9-203ENST00000397378 SCP2D1Q9UJQ7 156 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 FUT9Q9Y231 359 aa6.34□□□□□ -1.39
NEDD9-203ENST00000397378 A0A087WXM4 84 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 TRAV12-3A0A0B4J271 114 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 XKRY2A2RUG3 117 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 SYNGR2O43760 224 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 C1QBP02746 253 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 OR5G3P0C626 314 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 LINC00869P0C866 280 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 SLAQ13239 276 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 MRPL23Q16540 153 aaKnown RBP6.33□□□□□ -1.4
NEDD9-203ENST00000397378 ZNF431Q8TF32 576 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-203ENST00000397378 SPXQ9BT56 116 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 PRO0255Q9UI72 69 aa6.33□□□□□ -1.4
NEDD9-203ENST00000397378 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 ANKRD20A5PA0PJZ0 165 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 LRCOL1A6NCL2 159 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 K7EPK0 472 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 CTDSPLO15194 276 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 SPINK4O60575 86 aa6.32□□□□□ -1.4
NEDD9-203ENST00000397378 CCNKO75909 580 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms