RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 IGHV3-73A0A0B4J1V6 119 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 ESDP10768 282 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 LYPD2Q6UXB3 125 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 LY6G5BQ8NDX9 201 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 KLF12Q9Y4X4 402 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 EML5Q05BV3 1969 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 A0A1W2PPI3 338 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 COL8A2P25067 703 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 ZNF329Q86UD4 541 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 ZNF833PQ6ZTB9 187 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 HAPLN4Q86UW8 402 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 C3orf56Q8N813 242 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 TMEM158Q8WZ71 300 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 SPANXA1Q9NS26 97 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 LAMTOR3Q9UHA4 124 aa4.42□□□□□ -1.7
VPS13C-204ENST00000395898 RPL35AP18077 110 aaKnown RBP4.42□□□□□ -1.7
VPS13C-204ENST00000395898 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-204ENST00000395898 APOC4P55056 127 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 YPEL3P61236 119 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-204ENST00000395898 ZFAND6Q6FIF0 208 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 SHANK2-AS3Q9BTD1 123 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 TIMM21Q9BVV7 248 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 NCR2O95944 276 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 A0A0U1RRA0 63 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 NEGR1Q7Z3B1 354 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 PRIMA1Q86XR5 153 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 Q8TCH9 128 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 SPAG8Q99932 426 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-204ENST00000395898 A6NNC1 897 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 ARMS2P0C7Q2 107 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 CHAC1Q9BUX1 264 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
VPS13C-204ENST00000395898 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 GAGE2EQ4V326 116 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 GAGE2DQ9UEU5 116 aa4.41□□□□□ -1.7
VPS13C-204ENST00000395898 TRBV25-1A0A075B6N4 114 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 HGFACQ04756 655 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 C1orf159Q96HA4 380 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 ETV2O00321 342 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-204ENST00000395898 SYNJ2BPP57105 145 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 Q8TAT8 98 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 F8WEM9 126 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 LINC01619G3V211 115 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 I3L3M4 83 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 AMN1Q8IY45 258 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 FAM110DQ8TAY7 271 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-204ENST00000395898 SPXQ9BT56 116 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 PRSS46E5RG02 174 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 C2orf82Q6UX34 121 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 COL4A6Q14031 1691 aa4.4□□□□□ -1.7
VPS13C-204ENST00000395898 TRBV20-1A0A075B6N2 111 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV1-69DA0A0B4J2H0 117 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV1-69P01742 117 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 LHFPL4Q7Z7J7 247 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 LINC00311Q8N616 119 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 CDKN1BP46527 198 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 NPC2P61916 151 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 HIST1H4AP62805 103 aaKnown RBP4.4□□□□□ -1.71
VPS13C-204ENST00000395898 TEX36Q5VZQ5 186 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 Q86TA4 180 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 UBE2E2Q96LR5 201 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 ATP6V0E1O15342 81 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 Q0VG73 95 aa4.4□□□□□ -1.71
VPS13C-204ENST00000395898 SP5Q6BEB4 398 aaPredicted RBP4.4□□□□□ -1.71
VPS13C-204ENST00000395898 PLCE1Q9P212 2302 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 CEACAM8P31997 349 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-204ENST00000395898 FXYD7P58549 80 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-204ENST00000395898 NDUFA4O00483 81 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 SLAQ13239 276 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 REG4Q9BYZ8 158 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 OVOL3O00110 214 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 A0A0G2JRQ6 117 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 MCRIP2Q9BUT9 160 aaKnown RBP4.39□□□□□ -1.71
VPS13C-204ENST00000395898 TRAV13-1A0A0B4J241 112 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 CFHR2P36980 270 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 LINC00205P59089 165 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 DEFB131AP59861 70 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 TMEM14CQ9P0S9 112 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 A0A087X0K7 114 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV3-53P01767 116 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 Q6ZRM9 215 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 GAGE12BA1L429 117 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 INS-IGF2F8WCM5 200 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 K7EMI3 77 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 C3orf79P0CE67 100 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF492Q9P255 531 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 IGLV1-44P01699 117 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 TMEM256Q8N2U0 113 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 VWC2LB2RUY7 222 aa4.39□□□□□ -1.71
VPS13C-204ENST00000395898 H3BMM0 161 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms