RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TRAV5A0A0B4J249 113 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 SIX6O95475 246 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 IGLC2P0DOY2 106 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 CDKN1BP46527 198 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 LRRC37A5PQ49AS3 106 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 MORN5Q5VZ52 161 aa9.8□□□□□ -0.84
CXCL12-205ENST00000395794 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 H3BQ15 152 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 SSNA1O43805 119 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 HTN1P15515 57 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 TAS2R60P59551 318 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 OR5C1Q8NGR4 320 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 KCNIP2Q9NS61 270 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 TIMM9Q9Y5J7 89 aa9.79□□□□□ -0.84
CXCL12-205ENST00000395794 SLC17A3O00476 420 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 PET100P0DJ07 73 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 PRB4P10163 310 aaPredicted RBP9.78□□□□□ -0.84
CXCL12-205ENST00000395794 IFITM3Q01628 133 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 NHLH2Q02577 135 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 UBE2DNLQ8IWF7 75 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 THAP6Q8TBB0 222 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 MARVELD1Q9BSK0 173 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 NPCDR1Q9BY65 106 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 BATF3Q9NR55 127 aa9.78□□□□□ -0.84
CXCL12-205ENST00000395794 KMT2AQ03164 3969 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 H7BYZ3 331 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 ZNF253O75346 499 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 PRM2P04554 102 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 CLINT1Q14677 625 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 CCDC28AQ8IWP9 274 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 SAT2Q96F10 170 aaPredicted RBP9.77□□□□□ -0.85
CXCL12-205ENST00000395794 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 OR5AC2Q9NZP5 309 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
CXCL12-205ENST00000395794 TRBV19A0A075B6N1 114 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 C17orf112F2Z3M2 114 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 HIST1H1EP10412 219 aaKnown RBP9.76□□□□□ -0.85
CXCL12-205ENST00000395794 AZU1P20160 251 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 LEPP41159 167 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 ZNF493Q6ZR52 646 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 AAMDCQ9H7C9 122 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 ZNF586Q9NXT0 402 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 PRELID1Q9Y255 219 aa9.76□□□□□ -0.85
CXCL12-205ENST00000395794 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
CXCL12-205ENST00000395794 H2BFSP57053 126 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 PDE6HQ13956 83 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 BLNKQ8WV28 456 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 PPP1R1CQ8WVI7 109 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 MRPL53Q96EL3 112 aaKnown RBP9.75□□□□□ -0.85
CXCL12-205ENST00000395794 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
CXCL12-205ENST00000395794 F5H768 121 aa9.74□□□□□ -0.85
CXCL12-205ENST00000395794 H0YIZ8 118 aa9.74□□□□□ -0.85
CXCL12-205ENST00000395794 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
CXCL12-205ENST00000395794 SCGB1C1Q8TD33 95 aa9.74□□□□□ -0.85
CXCL12-205ENST00000395794 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
CXCL12-205ENST00000395794 WDR61Q9GZS3 305 aaKnown RBP9.74□□□□□ -0.85
CXCL12-205ENST00000395794 CBY3A6NI87 242 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 NPIPB6E9PJ23 425 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 J3KRW8 73 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 MPC2O95563 127 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 IFNA5P01569 189 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 ATP5G1P05496 136 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 CT45A10P0DMU9 189 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 PYYP10082 97 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 ATP5G3P48201 142 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 FCN2Q15485 313 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 RNF212Q495C1 297 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 GCSAMLQ5JQS6 135 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 GFI1BQ5VTD9 330 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 ATP5SQ99766 215 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
CXCL12-205ENST00000395794 PARD6GQ9BYG4 376 aaPredicted RBP9.73□□□□□ -0.85
CXCL12-205ENST00000395794 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
CXCL12-205ENST00000395794 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 SNURFLB1AK76 121 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 ATG101Q9BSB4 218 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
CXCL12-205ENST00000395794 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
CXCL12-205ENST00000395794 M0R3E3 92 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 NDUFB4O95168 129 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 SLC25A5P05141 298 aaKnown RBP9.71□□□□□ -0.86
CXCL12-205ENST00000395794 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 RPL12P30050 165 aaKnown RBP9.71□□□□□ -0.86
CXCL12-205ENST00000395794 ICAM4Q14773 271 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 KIR3DS1Q14943 382 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.86
CXCL12-205ENST00000395794 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.86
CXCL12-205ENST00000395794 PAXXQ9BUH6 204 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms