RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TRAV38-1A0A0B4J264 116 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TRAV41A0A0B4J266 112 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 A0A1W2PRS3 328 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TMEM212A6NML5 194 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SNRPGP15A8MWD9 76 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 IGLL5B9A064 214 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 K7ERJ3 54 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 LST1O00453 97 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SSSCA1O60232 199 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 PRM2P04554 102 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SMIM10L2AP0DMW4 78 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SMIM10L2BP0DMW5 78 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 HIST1H4AP62805 103 aaKnown RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 PRR4Q16378 134 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 Q6ZPA2 131 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 AAED1Q7RTV5 226 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 C19orf24Q9BVV8 132 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 C7orf77A4D0Y5 90 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 GEMIN2O14893 280 aaKnown RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 MGPP08493 103 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 RPL27AP46776 148 aaKnown RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 DAPP51397 102 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 NAA38Q9BRA0 125 aaKnown RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 IER3IP1Q9Y5U9 82 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 ATAD5Q96QE3 1844 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TRBV19A0A075B6N1 114 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 FABP5P3A8MUU1 101 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 RER1O15258 196 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 NDUFB3O43676 98 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TRGV3P03979 118 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 CTSDP07339 412 aaPredicted RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 RPS4Y1P22090 263 aaKnown RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 EDDM3BP56851 147 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 SERF2P84101 59 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 GFI1BQ5VTD9 330 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 C9orf47Q6ZRZ4 202 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 OPRPNQ99935 248 aaPredicted RBP2.63□□□□□ -1.99
XRN1-202ENST00000392981 MYO7AQ13402 2215 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 IGHV1OR15-9A0A0B4J2B8 117 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 IGKV6-21A0A0C4DH24 114 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 OR51F1A6NGY5 319 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TMEM256-PLSCR3K7ERE1 68 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 ZNF737O75373 536 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 FXYD7P58549 80 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 PSMG4Q5JS54 123 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 CLLU1OSQ5K130 101 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 ZNF880Q6PDB4 577 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 TMEM106AQ96A25 262 aa2.63□□□□□ -1.99
XRN1-202ENST00000392981 ANK2Q01484 3957 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A0A0G2JMM0 328 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TRDV1A0A1B0GX56 115 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A0A1W2PPB8 328 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A8MUN3 132 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 KIR3DP1A8MWS1 328 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 LEPROTL1O95214 131 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 LRRC37A2A6NM11 1700 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TRAV27A0A087WT01 109 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A0A087WX48 190 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A0A0J9YW62 118 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 CCL22O00626 93 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 IAPPP10997 89 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 ZNF345Q14585 488 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 NCBP2-AS2Q69YL0 99 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 SLC25A26Q70HW3 274 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 GKN2Q86XP6 184 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TIAM2Q8IVF5 1701 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 C7orf71A4D174 169 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 HBBP68871 147 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 SLC38A11Q08AI6 406 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 HSD52Q0P140 79 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 MORN3Q6PF18 240 aaPredicted RBP2.62□□□□□ -1.99
XRN1-202ENST00000392981 IGFL2Q6UWQ7 119 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 CYB561D1Q8N8Q1 229 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 PPP1R1CQ8WVI7 109 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 MUCL1Q96DR8 90 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 YPEL2Q96QA6 119 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TMEM167BQ9NRX6 74 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 HS3ST2Q9Y278 367 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 IGHV3-66A0A0C4DH42 116 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TLCD2A6NGC4 264 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 C15orf65H3BRN8 121 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 H3BT86 120 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 TRACP01848 142 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 DPTQ07507 201 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 KIAA0040Q15053 153 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 SFTA2Q6UW10 78 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 POM121L12Q8N7R1 296 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 SCN9AQ15858 1988 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 FRMPD3Q5JV73 1810 aa2.62□□□□□ -1.99
XRN1-202ENST00000392981 A0A087WWC5 75 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.61□□□□□ -1.99
XRN1-202ENST00000392981 OVOL1O14753 267 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 TNFP01375 233 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 IGLV3-25P01717 112 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 CD7P09564 240 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 C17orf82Q86X59 251 aaPredicted RBP2.61□□□□□ -1.99
XRN1-202ENST00000392981 AICDAQ9GZX7 198 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 DYSFO75923 2080 aa2.61□□□□□ -1.99
XRN1-202ENST00000392981 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms