RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SIGLEC9Q9Y336 463 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 Q8TAT8 98 aa15.91■□□□□ 0.14
SHANK1-203ENST00000391813 TMEM200BQ69YZ2 307 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 SIGLEC15Q6ZMC9 328 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 Q8N8P6 123 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 LINC00477Q96M19 166 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 TECTAO75443 2155 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 IGHV1-3A0A0C4DH29 117 aa15.9■□□□□ 0.14
SHANK1-203ENST00000391813 IGKV1-16P04430 117 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 OVOL2Q9BRP0 275 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 VWC2Q2TAL6 325 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 ANAPC1Q9H1A4 1944 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 PAX8Q06710 450 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 Q8NFD4 153 aa15.89■□□□□ 0.13
SHANK1-203ENST00000391813 TMEM213A2RRL7 107 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 RNF166Q96A37 237 aaPredicted RBP15.88■□□□□ 0.13
SHANK1-203ENST00000391813 IGHV3-64A0A075B6Q5 118 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 POLEQ07864 2286 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 OOSP1A8MZH6 123 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 PRR20EP86478 221 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 PRR20CP86479 221 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 PRR20DP86480 221 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 PRR20BP86481 221 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 PRR20AP86496 221 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 GLMPQ8WWB7 406 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 C9orf153Q5TBE3 101 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 CEND1Q8N111 149 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 NDUFA4L2Q9NRX3 87 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 CREBBPQ92793 2442 aa15.88■□□□□ 0.13
SHANK1-203ENST00000391813 K7EN84 100 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 RSPO1Q2MKA7 263 aaPredicted RBP15.87■□□□□ 0.13
SHANK1-203ENST00000391813 NUP210Q8TEM1 1887 aaPredicted RBP15.87■□□□□ 0.13
SHANK1-203ENST00000391813 MYMXA0A1B0GTQ4 84 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 J3QKU1 62 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 OR11H6Q8NGC7 330 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 ZNF747Q9BV97 191 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 H3BMM0 161 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 WNT2P09544 360 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 UBE2WQ96B02 151 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 NPFFR1Q9GZQ6 430 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 SIGLEC8Q9NYZ4 499 aa15.87■□□□□ 0.13
SHANK1-203ENST00000391813 LYPD6Q86Y78 171 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 DOPEY2Q9Y3R5 2298 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 A0A1W2PPI3 338 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 MRPL51Q4U2R6 128 aaKnown RBP15.86■□□□□ 0.13
SHANK1-203ENST00000391813 Q6ZVH6 145 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 GAFA1Q96PS6 74 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 H3BMG7 143 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 C15orf32Q32M92 178 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 BOD1L2Q8IYS8 172 aa15.86■□□□□ 0.13
SHANK1-203ENST00000391813 TMEM86BQ8N661 226 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 EDA2RQ9HAV5 297 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 TRBV19A0A075B6N1 114 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 NUPR1O60356 82 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 IFITM1P13164 125 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 IGKV3D-20A0A0C4DH25 116 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 SLC25A20O43772 301 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 C14orf178Q8N769 122 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-203ENST00000391813 LINC01587Q99440 93 aa15.85■□□□□ 0.13
SHANK1-203ENST00000391813 ZNF876PQ49A33 203 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 ZNF524Q96C55 264 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 ZNF672Q499Z4 452 aaPredicted RBP15.84■□□□□ 0.13
SHANK1-203ENST00000391813 TMEM14CQ9P0S9 112 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 CD24P25063 80 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 TDRG1Q3Y452 100 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 PRSS57Q6UWY2 283 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 C5orf64Q2M2E5 130 aa15.84■□□□□ 0.13
SHANK1-203ENST00000391813 PIEZO1Q92508 2521 aa15.83■□□□□ 0.13
SHANK1-203ENST00000391813 TRAV8-3A0A0A6YYJ7 113 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE12JA6NER3 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 TMEM178BH3BS89 294 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE7O76087 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 CRPP02741 224 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE12FP0CL80 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE12GP0CL81 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE12IP0CL82 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 INAFM2P0DMQ5 153 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE4Q13068 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 C2orf66Q6UXQ4 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 IGHV3OR16-10A0A075B7F0 116 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 F8VRH5 84 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 HEATR1Q9H583 2144 aaKnown RBP15.83■□□□□ 0.12
SHANK1-203ENST00000391813 C1orf122Q6ZSJ8 110 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 TIMM21Q9BVV7 248 aa15.83■□□□□ 0.12
SHANK1-203ENST00000391813 ZNF688P0C7X2 276 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 RASL10AQ92737 203 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 SLC25A16P16260 332 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 CFAP161Q6P656 301 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 LY6G5BQ8NDX9 201 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 FER1L5A0AVI2 2057 aa15.82■□□□□ 0.12
SHANK1-203ENST00000391813 A0A0U1RRA0 63 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 PF4P02776 101 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 POU2AF1Q16633 256 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 TMEM141Q96I45 108 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 SPANXCQ9NY87 97 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE5Q13069 117 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 GAGE6Q13070 117 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 LCNL1Q6ZST4 164 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 C1QTNF4Q9BXJ3 329 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms