RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 RAB24Q969Q5 203 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
SNRPB-201ENST00000381342 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 PRAC2D3DTV9 90 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
SNRPB-201ENST00000381342 FXYD7P58549 80 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 AKR1C8PQ5T2L2 129 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 MORN3Q6PF18 240 aaPredicted RBP11.82□□□□□ -0.52
SNRPB-201ENST00000381342 Q6ZWC4 215 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 EXOC3-AS1Q8N2X6 119 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 STAB2Q8WWQ8 2551 aa11.82□□□□□ -0.52
SNRPB-201ENST00000381342 M0R3E3 92 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 HIST1H1AQ02539 215 aaPredicted RBP11.81□□□□□ -0.52
SNRPB-201ENST00000381342 ZNF726P1Q15940 193 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 PQLC2Q6ZP29 291 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 SLC51BQ86UW2 128 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 OR8A1Q8NGG7 326 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 RNF183Q96D59 192 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 ACTR3CQ9C0K3 210 aaPredicted RBP11.81□□□□□ -0.52
SNRPB-201ENST00000381342 SLC35B3Q9H1N7 401 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 CLEC5AQ9NY25 188 aa11.81□□□□□ -0.52
SNRPB-201ENST00000381342 A8MTW9 85 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 SPRY2O43597 315 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 DUSP14O95147 198 aaKnown RBP11.8□□□□□ -0.52
SNRPB-201ENST00000381342 STAG3L2P0CL84 134 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 STAG3L3P0CL85 134 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
SNRPB-201ENST00000381342 PSG9Q00887 426 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 ICAM4Q14773 271 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 CLUHP3Q96NS8 147 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 XCL2Q9UBD3 114 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 TP53TG1Q9Y2A0 90 aa11.8□□□□□ -0.52
SNRPB-201ENST00000381342 NUTF2P61970 127 aaKnown RBP11.79□□□□□ -0.52
SNRPB-201ENST00000381342 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
SNRPB-201ENST00000381342 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
SNRPB-201ENST00000381342 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
SNRPB-201ENST00000381342 CTXND1A0A1B0GTU2 59 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 TPT1P13693 172 aaKnown RBP11.78□□□□□ -0.52
SNRPB-201ENST00000381342 GCHFRP30047 84 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
SNRPB-201ENST00000381342 BAP18Q8IXM2 172 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 Q9H3A6 140 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
SNRPB-201ENST00000381342 M0R2Z0 102 aa11.77□□□□□ -0.53
SNRPB-201ENST00000381342 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.53
SNRPB-201ENST00000381342 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
SNRPB-201ENST00000381342 CXorf1O96002 111 aa11.76□□□□□ -0.53
SNRPB-201ENST00000381342 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
SNRPB-201ENST00000381342 FHITP49789 147 aa11.76□□□□□ -0.53
SNRPB-201ENST00000381342 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
SNRPB-201ENST00000381342 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
SNRPB-201ENST00000381342 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
SNRPB-201ENST00000381342 C1QTNF4Q9BXJ3 329 aa11.76□□□□□ -0.53
SNRPB-201ENST00000381342 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 ERCC8Q13216 396 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 LYPD1Q8N2G4 141 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 OR11H2Q8NH07 326 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 RARRES2Q99969 163 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
SNRPB-201ENST00000381342 TEX261Q6UWH6 196 aa11.74□□□□□ -0.53
SNRPB-201ENST00000381342 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
SNRPB-201ENST00000381342 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
SNRPB-201ENST00000381342 RPH3ALQ9UNE2 315 aa11.74□□□□□ -0.53
SNRPB-201ENST00000381342 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
SNRPB-201ENST00000381342 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
SNRPB-201ENST00000381342 IFITM2Q01629 132 aa11.73□□□□□ -0.53
SNRPB-201ENST00000381342 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
SNRPB-201ENST00000381342 TMPRSS5Q9H3S3 457 aa11.73□□□□□ -0.53
SNRPB-201ENST00000381342 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
SNRPB-201ENST00000381342 IGHV3OR16-12A0A075B7B8 117 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 A0A0J9YWU9 116 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 PGPA6NDG6 321 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 CRXO43186 299 aaPredicted RBP11.72□□□□□ -0.53
SNRPB-201ENST00000381342 AMBPP02760 352 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 CT45A10P0DMU9 189 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 CSN1S1P47710 185 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 VGLL1Q99990 258 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 X6R8D5 127 aa11.72□□□□□ -0.53
SNRPB-201ENST00000381342 A0A1B0GV50 99 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
SNRPB-201ENST00000381342 GGTLC3B5MD39 225 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 RGS13O14921 159 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 INSP01308 110 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 IFNA7P01567 189 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 GNG5P63218 68 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 ZNF680Q8NEM1 530 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms