RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RPL29P47914 159 aaKnown RBP14.83□□□□□ -0.04
VSX1-201ENST00000376707 HBG1P69891 147 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 HBG2P69892 147 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 FCN2Q15485 313 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 GPN1Q9HCN4 374 aaPredicted RBP14.83□□□□□ -0.04
VSX1-201ENST00000376707 IFITM3Q01628 133 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 ATP6V1FQ16864 119 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 OR1L4Q8NGR5 311 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 SAT2Q96F10 170 aaPredicted RBP14.82□□□□□ -0.04
VSX1-201ENST00000376707 C16orf74Q96GX8 76 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 PFDN5Q99471 154 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 PTTG2Q9NZH5 202 aa14.82□□□□□ -0.04
VSX1-201ENST00000376707 UBE2L5PA0A1B0GUS4 154 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 H3BQ15 152 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 SLC17A3O00476 420 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 ATP5G1P05496 136 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 ATP5G3P48201 142 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 FAM3BP58499 235 aaPredicted RBP14.81□□□□□ -0.04
VSX1-201ENST00000376707 SLC39A9Q9NUM3 307 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
VSX1-201ENST00000376707 PXMP4Q9Y6I8 212 aa14.81□□□□□ -0.04
VSX1-201ENST00000376707 CBY3A6NI87 242 aa14.8□□□□□ -0.04
VSX1-201ENST00000376707 H3BTX0 84 aa14.8□□□□□ -0.04
VSX1-201ENST00000376707 BAXQ07812 192 aa14.8□□□□□ -0.04
VSX1-201ENST00000376707 GUK1Q16774 197 aa14.8□□□□□ -0.04
VSX1-201ENST00000376707 OR10J6PQ8NGY7 276 aa14.8□□□□□ -0.04
VSX1-201ENST00000376707 TRAV5A0A0B4J249 113 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 H7BYZ3 331 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 PRAF2O60831 178 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 MPDU1O75352 247 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 NUDT3O95989 172 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 C1orf134Q5TEV5 83 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 ZNF493Q6ZR52 646 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 NMES1Q9C002 83 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 DNAH17Q9UFH2 4485 aa14.79□□□□□ -0.04
VSX1-201ENST00000376707 ZNF253O75346 499 aa14.78□□□□□ -0.04
VSX1-201ENST00000376707 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
VSX1-201ENST00000376707 FGF7P21781 194 aa14.78□□□□□ -0.04
VSX1-201ENST00000376707 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
VSX1-201ENST00000376707 C20orf144Q9BQM9 153 aa14.78□□□□□ -0.04
VSX1-201ENST00000376707 NOP10Q9NPE3 64 aaKnown RBP14.78□□□□□ -0.04
VSX1-201ENST00000376707 PRAC2D3DTV9 90 aa14.77□□□□□ -0.05
VSX1-201ENST00000376707 RNASE8Q8TDE3 154 aaKnown RBP14.77□□□□□ -0.05
VSX1-201ENST00000376707 PARD6GQ9BYG4 376 aaPredicted RBP14.77□□□□□ -0.05
VSX1-201ENST00000376707 ZNF586Q9NXT0 402 aa14.77□□□□□ -0.05
VSX1-201ENST00000376707 E5RGE8 158 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 INMT-MINDY4F8WBC2 141 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 SIX6O95475 246 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 RLN2P04090 185 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 NHLH2Q02577 135 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 CCDC28AQ8IWP9 274 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 MARVELD1Q9BSK0 173 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 NPCDR1Q9BY65 106 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 TMEM14CQ9P0S9 112 aa14.76□□□□□ -0.05
VSX1-201ENST00000376707 CYCSP99999 105 aaKnown RBP14.75□□□□□ -0.05
VSX1-201ENST00000376707 KIR3DS1Q14943 382 aa14.75□□□□□ -0.05
VSX1-201ENST00000376707 GFI1BQ5VTD9 330 aa14.75□□□□□ -0.05
VSX1-201ENST00000376707 OR5C1Q8NGR4 320 aa14.75□□□□□ -0.05
VSX1-201ENST00000376707 SLC25A31Q9H0C2 315 aa14.75□□□□□ -0.05
VSX1-201ENST00000376707 OR5AC2Q9NZP5 309 aa14.75□□□□□ -0.05
VSX1-201ENST00000376707 H0YIZ8 118 aa14.74□□□□□ -0.05
VSX1-201ENST00000376707 CCL18P55774 89 aa14.74□□□□□ -0.05
VSX1-201ENST00000376707 ODF3Q96PU9 254 aa14.74□□□□□ -0.05
VSX1-201ENST00000376707 PKHD1P08F94 4074 aa14.74□□□□□ -0.05
VSX1-201ENST00000376707 NACAE9PAV3 2078 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 TRBV19A0A075B6N1 114 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 NPIPB6E9PJ23 425 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 J3KRW8 73 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 H2BFSP57053 126 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 CLINT1Q14677 625 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 ZNRF2Q8NHG8 242 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 RNF141Q8WVD5 230 aa14.73□□□□□ -0.05
VSX1-201ENST00000376707 MRPL53Q96EL3 112 aaKnown RBP14.73□□□□□ -0.05
VSX1-201ENST00000376707 HIST1H1EP10412 219 aaKnown RBP14.72□□□□□ -0.05
VSX1-201ENST00000376707 LEPP41159 167 aa14.72□□□□□ -0.05
VSX1-201ENST00000376707 PDE6HQ13956 83 aa14.72□□□□□ -0.05
VSX1-201ENST00000376707 LRRC37A5PQ49AS3 106 aa14.72□□□□□ -0.05
VSX1-201ENST00000376707 PCLOQ9Y6V0 5065 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 NBDYA0A0U1RRE5 68 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 SNURFLB1AK76 121 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 NDUFB4O95168 129 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 CT45A10P0DMU9 189 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 OR5I1Q13606 314 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 GCSAMLQ5JQS6 135 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 THAP6Q8TBB0 222 aa14.71□□□□□ -0.05
VSX1-201ENST00000376707 TRAV12-3A0A0B4J271 114 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 DEFA1P59665 94 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 DEFA3P59666 94 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 PPP1R1CQ8WVI7 109 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 WDR61Q9GZS3 305 aaKnown RBP14.7□□□□□ -0.06
VSX1-201ENST00000376707 PRELID1Q9Y255 219 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 LINC00588Q9Y4M8 146 aa14.7□□□□□ -0.06
VSX1-201ENST00000376707 GAGE12BA1L429 117 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 GAGE7O76087 117 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 GAGE12FP0CL80 117 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 GAGE12GP0CL81 117 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 GAGE12IP0CL82 117 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 PYYP10082 97 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 ZNF575Q86XF7 245 aa14.69□□□□□ -0.06
VSX1-201ENST00000376707 LINC00612Q8N6U2 182 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms