RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 C14orf178Q8N769 122 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-203ENST00000375274 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 ZNF562Q6V9R5 426 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 CHAC1Q9BUX1 264 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
PTCH1-203ENST00000375274 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.92
PTCH1-203ENST00000375274 PRTN3P24158 256 aa9.27□□□□□ -0.92
PTCH1-203ENST00000375274 CNTFRP26992 372 aa9.27□□□□□ -0.92
PTCH1-203ENST00000375274 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.92
PTCH1-203ENST00000375274 Q8TCH9 128 aa9.27□□□□□ -0.92
PTCH1-203ENST00000375274 K7EN84 100 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 IGLV1-44P01699 117 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 CST9LQ9H4G1 147 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 E7EQL1 145 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 DKK1O94907 266 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 TDGF1P13385 188 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 VWC2Q2TAL6 325 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 PAX2Q02962 417 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
PTCH1-203ENST00000375274 TRBV7-1A0A0A6YYK4 115 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ESDP10768 282 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 EFNA4P52798 201 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 GAGE1Q13065 139 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 TNCP24821 2201 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 IGLV3-9A0A075B6K5 115 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 TRGV11A0A075B6L2 103 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 VCYO14598 125 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 LOXP28300 417 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ERCC8Q13216 396 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ASPHD1Q5U4P2 390 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 ARHGAP21Q5T5U3 1957 aa9.26□□□□□ -0.93
PTCH1-203ENST00000375274 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 LINC00311Q8N616 119 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 DLX4Q92988 240 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-203ENST00000375274 FXYD5Q96DB9 178 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 PRR14LQ5THK1 2151 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 EML6Q6ZMW3 1958 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 COL4A3Q01955 1670 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 TRGV2A0A075B6R0 118 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 PRSS46E5RG02 174 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 PRSS22Q9GZN4 317 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
PTCH1-203ENST00000375274 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 YAE1D1Q9NRH1 226 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 PEMTQ9UBM1 199 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 C11orf53Q8IXP5 236 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 ANAPC13Q9BS18 74 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 DYSFO75923 2080 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 COX8AP10176 69 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 C3orf36Q3SXR2 165 aa9.24□□□□□ -0.93
PTCH1-203ENST00000375274 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-203ENST00000375274 FCN3O75636 299 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 NDUFB8O95169 186 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 IGLC1P0CG04 106 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 PRR25Q96S07 402 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 CHD3Q12873 2000 aaKnown RBP9.23□□□□□ -0.93
PTCH1-203ENST00000375274 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 H3BUX3 64 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 MRPL51Q4U2R6 128 aaKnown RBP9.23□□□□□ -0.93
PTCH1-203ENST00000375274 PRSS57Q6UWY2 283 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 BRD3OSQ6XYD6 125 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 DIAPH2-AS1Q14236 149 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 TMEM14CQ9P0S9 112 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 NUPR1O60356 82 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 LGALS9BQ3B8N2 356 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 LGALS9CQ6DKI2 356 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 ADAMTSL5Q6ZMM2 481 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 THAP8Q8NA92 274 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
PTCH1-203ENST00000375274 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 SAA4P35542 130 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 KIAA1671Q9BY89 1806 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 M0R2P5 195 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 MAJINQ3KP22 176 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 KRTAP27-1Q3LI81 207 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 SIGLEC8Q9NYZ4 499 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 NOTCH2Q04721 2471 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms