RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 CFPP27918 469 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 TMEM200BQ69YZ2 307 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 DTX2Q86UW9 622 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 CSTL1Q9H114 145 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 SRRM4A7MD48 611 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 MST1LQ2TV78 715 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 IGF2-ASQ6U949 168 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 ASCL4Q6XD76 172 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 EDA2RQ9HAV5 297 aa9.98□□□□□ -0.81
NPLOC4-202ENST00000374747 ATMQ13315 3056 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 COL6A6A6NMZ7 2263 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF329Q86UD4 541 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 AMN1Q8IY45 258 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 H0YJW9 148 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 GNLYP22749 145 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 ZNF48Q96MX3 618 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 CADP27708 2225 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 TMEM178BH3BS89 294 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 ITGB1BP1O14713 200 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 C1orf122Q6ZSJ8 110 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 Q86TA4 180 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 MCRIP2Q9BUT9 160 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
NPLOC4-202ENST00000374747 LILRA1O75019 489 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 MAJINQ3KP22 176 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 A0A0G2JRQ6 117 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 KIAA2026Q5HYC2 2103 aa9.96□□□□□ -0.81
NPLOC4-202ENST00000374747 WIPF3A6NGB9 483 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 OOSP1A8MZH6 123 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 C9JAW5 83 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 EFNA4P52798 201 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 C14orf178Q8N769 122 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 TECTAO75443 2155 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 Q6P435 159 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 RNF138Q8WVD3 245 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 LINC00527Q9UJ94 153 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 MGAQ8IWI9 3026 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 C9JQL5 133 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 SMKR1H3BMG3 65 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 LEPROTO15243 131 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 C20orf204Q6ZNR8 217 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 SNHG12Q9BXW3 62 aa9.96□□□□□ -0.82
NPLOC4-202ENST00000374747 CEACAM8P31997 349 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 C5orf24Q7Z6I8 188 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 USF3Q68DE3 2245 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 ZNF415Q09FC8 603 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 IGHV3-73A0A0B4J1V6 119 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 PFN1P07737 140 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 A0A087WX48 190 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 Q6ZRM9 215 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 STPG4Q8N801 248 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 EML6Q6ZMW3 1958 aa9.95□□□□□ -0.82
NPLOC4-202ENST00000374747 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 RNASE2P10153 161 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 MINOS1Q5TGZ0 78 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 C18orf32Q8TCD1 76 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 DEFB104AQ8WTQ1 72 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 MINOS1-NBL1R4GNA1 71 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 POLEQ07864 2286 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 PCNX1Q96RV3 2341 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 FAM231BA6NCW3 169 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 DSCR9P59020 149 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 VWC2LB2RUY7 222 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 C5orf64Q2M2E5 130 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 DKK1O94907 266 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 GAGE2AQ6NT46 116 aa9.94□□□□□ -0.82
NPLOC4-202ENST00000374747 INTS1Q8N201 2190 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 LY6G5BQ8NDX9 201 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ABCA1O95477 2261 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 CMC4P56277 68 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 VGLL1Q99990 258 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ZNF492Q9P255 531 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ARMS2P0C7Q2 107 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 VMO1Q7Z5L0 202 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ZNF581Q9P0T4 197 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 HEATR1Q9H583 2144 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 CACNA1BQ00975 2339 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ATG2AQ2TAZ0 1938 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 ERCC8Q13216 396 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 PDE6HQ13956 83 aa9.93□□□□□ -0.82
NPLOC4-202ENST00000374747 LINC00479Q96M42 142 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms