RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP1-201ENST00000373327 HIVEP2P31629 2446 aa14.02□□□□□ -0.16
TRAF3IP1-201ENST00000373327 NBL1P41271 181 aa14.02□□□□□ -0.16
TRAF3IP1-201ENST00000373327 LINC00311Q8N616 119 aa14.02□□□□□ -0.16
TRAF3IP1-201ENST00000373327 C1orf159Q96HA4 380 aa14.02□□□□□ -0.16
TRAF3IP1-201ENST00000373327 ATP6V0E1O15342 81 aa14.02□□□□□ -0.17
TRAF3IP1-201ENST00000373327 IGKV1-17P01599 117 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 CACNG7P62955 275 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 LBHQ53QV2 105 aaPredicted RBP14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZC2HC1AQ96GY0 325 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ORMDL3Q8N138 153 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 BEND2Q8NDZ0 799 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 OR10J6PQ8NGY7 276 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 KAAG1Q9UBP8 84 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 SH2D1AO60880 128 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 MAP1LC3AQ9H492 121 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TRAV9-2A0A087WT02 112 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 NUTF2P61970 127 aaKnown RBP14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 PIMREGQ9BSJ6 248 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TMEM160Q9NX00 188 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZFP30Q9Y2G7 519 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 SMIM27A0A1W2PRY6 76 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 GCSHP23434 173 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 Q0VG73 95 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 IFI27P40305 119 aaPredicted RBP13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 PSG3Q16557 428 aa13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 KALRNO60229 2985 aa13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 IGKV1D-37A0A075B6S9 117 aa13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZNF414Q96IQ9 312 aa13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ALKBH7Q9BT30 221 aaPredicted RBP13.99□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TRAV8-6A0A0B4J262 113 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZNF562Q6V9R5 426 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 CDSNQ15517 529 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 FABP5P3A8MUU1 101 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 H3BUX3 64 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 LINC00322Q6ZN03 302 aaPredicted RBP13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 BCL6BQ8N143 479 aaPredicted RBP13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 THAP8Q8NA92 274 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 EFNA4P52798 201 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TMEM249Q2WGJ8 235 aa13.98□□□□□ -0.17
TRAF3IP1-201ENST00000373327 H3BVH4 76 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 TGFAP01135 160 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 COA6Q5JTJ3 125 aaKnown RBP13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 MYOZ3Q8TDC0 251 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 VGLL1Q99990 258 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 JMJD1CQ15652 2540 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 A0A087X0K7 114 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 IGLV1-47P01700 117 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 MPV17L2Q567V2 206 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZNF502Q8TBZ5 544 aa13.97□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ZNF462Q96JM2 2506 aa13.96□□□□□ -0.17
TRAF3IP1-201ENST00000373327 K7EIM0 57 aa13.96□□□□□ -0.17
TRAF3IP1-201ENST00000373327 C11orf44Q8N8P7 122 aa13.96□□□□□ -0.17
TRAF3IP1-201ENST00000373327 ADORA2A-AS1P86434 159 aa13.96□□□□□ -0.18
TRAF3IP1-201ENST00000373327 FOXC2Q99958 501 aa13.96□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TACC2O95359 2948 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGF2BP2-AS1Q96M15 143 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TP73-AS1Q9UF72 201 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 LEPP41159 167 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 ATP5L2Q7Z4Y8 100 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 C2orf88Q9BSF0 95 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 NPFFO15130 113 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 STPG4Q8N801 248 aa13.95□□□□□ -0.18
TRAF3IP1-201ENST00000373327 GP9P14770 177 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 ACANP16112 2415 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TEX22C9J3V5 150 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 SYS1-DBNDD2H3BUS1 97 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 ZFP36P26651 326 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 RPL24P83731 157 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 ZZEF1O43149 2961 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TRAV41A0A0B4J266 112 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGLV2-8P01709 118 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGF2-ASQ6U949 168 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 GTSF1Q8WW33 167 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 DPF1Q92782 380 aa13.94□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGHV3OR16-12A0A075B7B8 117 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGLL1P15814 213 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 M0R1W7 72 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 PAX8Q06710 450 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 NRGNQ92686 78 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 SOX21Q9Y651 276 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 EBLN2Q6P2I7 272 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 I3L2K1 104 aa13.93□□□□□ -0.18
TRAF3IP1-201ENST00000373327 DEFB1P60022 68 aa13.92□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TMEM97Q5BJF2 176 aa13.92□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
TRAF3IP1-201ENST00000373327 TSPOP30536 169 aa13.92□□□□□ -0.18
TRAF3IP1-201ENST00000373327 FN1P02751 2386 aaKnown RBP13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 IGHV1-24A0A0C4DH33 117 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 SFTPCP11686 197 aa13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 RPS20P60866 119 aaKnown RBP13.91□□□□□ -0.18
TRAF3IP1-201ENST00000373327 RNF5Q99942 180 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms