RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DLX1P56177 255 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 SLC25A15Q9Y619 301 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 EVI2AP22794 236 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 PIEZO2Q9H5I5 2752 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 SERTM2A0A1B0GWG4 89 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 IGHG4P01861 327 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 C12orf74Q32Q52 190 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 LCNL1Q6ZST4 164 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 SEM1Q6ZVN7 128 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 CNEP1R1Q8N9A8 125 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 PPP1R35Q8TAP8 253 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 CFIP05156 583 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 EGR2P11161 476 aaPredicted RBP9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 OR4C13Q8NGP0 309 aa9.13□□□□□ -0.95
SMARCA1-201ENST00000371121 MALRD1Q5VYJ5 2156 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 CCL11P51671 97 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 IGLV3-9A0A075B6K5 115 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 I3L2K1 104 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 XGP55808 180 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 A0A1B0GW15 77 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 TMEM200BQ69YZ2 307 aa9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-201ENST00000371121 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 IGHV1-46P01743 117 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 ZNF576Q9H609 170 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 TMEM8BA6NDV4 472 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 TM4SF5O14894 197 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 SCGB2A2Q13296 93 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 IGHV3-72A0A0B4J1Y9 119 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 KLRC4-KLRK1H3BQV0 150 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 LYZP61626 148 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 ZC2HC1BQ5TFG8 222 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 ZNF479Q96JC4 524 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 GEMIN7Q9H840 131 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-201ENST00000371121 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 TEX36Q5VZQ5 186 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 SSUH2Q9Y2M2 353 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 DLX6P56179 175 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 PRB3Q04118 309 aaPredicted RBP9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 NGBQ9NPG2 151 aa9.1□□□□□ -0.95
SMARCA1-201ENST00000371121 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 SHISA9B4DS77 424 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 H3BRN7 92 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 RBP4P02753 201 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 SRSF1Q07955 248 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 FOXI1Q12951 378 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 ZNF502Q8TBZ5 544 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 SH3BGRL2Q9UJC5 107 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 MRPS17Q9Y2R5 130 aaKnown RBP9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 LEPP41159 167 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 OR10X1Q8NGY0 326 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 ZNF318Q5VUA4 2279 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 K7EQM0 130 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 IGKCP01834 107 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 IGHG3P01860 377 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 MC5RP33032 325 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 Q6AWC8 147 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 PRSS33Q8NF86 280 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
SMARCA1-201ENST00000371121 HLA-DRB4P13762 266 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 RNF7Q9UBF6 113 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 HLA-DRB4X5D2U9 266 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 K7EM74 188 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 ZNF491Q8N8L2 437 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 FCER1GP30273 86 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 CKS2P33552 79 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 SUB1P53999 127 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 TMEM178AQ8NBL3 297 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 PTH2Q96A98 100 aa9.08□□□□□ -0.96
SMARCA1-201ENST00000371121 LYPD2Q6UXB3 125 aa9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 RNF183Q96D59 192 aa9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 K7EIM0 57 aa9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 NHLRC4P0CG21 123 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 Q8TAT8 98 aa9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 HRNRQ86YZ3 2850 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 ZNF418Q8TF45 676 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-201ENST00000371121 TMEM158Q8WZ71 300 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms