RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 IGHG3P01860 377 aa12.8□□□□□ -0.36
COL17A1-202ENST00000369733 THADAQ6YHU6 1953 aa12.8□□□□□ -0.36
COL17A1-202ENST00000369733 WIPF2Q8TF74 440 aaPredicted RBP12.8□□□□□ -0.36
COL17A1-202ENST00000369733 ZDBF2Q9HCK1 2354 aa12.8□□□□□ -0.36
COL17A1-202ENST00000369733 MBD3L4A6NDZ8 208 aaPredicted RBP12.8□□□□□ -0.36
COL17A1-202ENST00000369733 MBD3L3A6NE82 208 aaPredicted RBP12.8□□□□□ -0.36
COL17A1-202ENST00000369733 MBD3L5A6NJ08 208 aaPredicted RBP12.8□□□□□ -0.36
COL17A1-202ENST00000369733 MBD3L2Q8NHZ7 208 aaPredicted RBP12.8□□□□□ -0.36
COL17A1-202ENST00000369733 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
COL17A1-202ENST00000369733 CEP250Q9BV73 2442 aa12.79□□□□□ -0.36
COL17A1-202ENST00000369733 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
COL17A1-202ENST00000369733 TRBV7-1A0A0A6YYK4 115 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
COL17A1-202ENST00000369733 TRGV2A0A075B6R0 118 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 COX6B1P14854 86 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 ZC2HC1AQ96GY0 325 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 PLXNB3Q9ULL4 1909 aa12.78□□□□□ -0.36
COL17A1-202ENST00000369733 IGHV3-73A0A0B4J1V6 119 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 PI4KAP42356 2102 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 TMEM14CQ9P0S9 112 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 DIDO1Q9BTC0 2240 aaKnown RBP12.77□□□□□ -0.37
COL17A1-202ENST00000369733 MYMXA0A1B0GTQ4 84 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 K7ERJ3 54 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
COL17A1-202ENST00000369733 CEND1Q8N111 149 aa12.77□□□□□ -0.37
COL17A1-202ENST00000369733 GAGE12HA6NDE8 117 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 NPYP01303 97 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 SIVA1O15304 175 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 SLC25A16P16260 332 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 KLF12Q9Y4X4 402 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 A0A087WWL8 130 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 THAP8Q8NA92 274 aa12.76□□□□□ -0.37
COL17A1-202ENST00000369733 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 LTAP01374 205 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 M0R1W7 72 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 PPDPFLQ8WWR9 84 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 HEATR1Q9H583 2144 aaKnown RBP12.75□□□□□ -0.37
COL17A1-202ENST00000369733 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 GATA4P43694 442 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 AZU1P20160 251 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 PRR25Q96S07 402 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 TIMM21Q9BVV7 248 aa12.75□□□□□ -0.37
COL17A1-202ENST00000369733 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 A0A0G2JNJ9 132 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 TPSG1Q9NRR2 321 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 MRPL35Q9NZE8 188 aaKnown RBP12.74□□□□□ -0.37
COL17A1-202ENST00000369733 Q9UFV3 132 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 H3BRN7 92 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 FCN3O75636 299 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 ATP6V0BQ99437 205 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 FGF23Q9GZV9 251 aaPredicted RBP12.74□□□□□ -0.37
COL17A1-202ENST00000369733 DKK2Q9UBU2 259 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 H3BMG7 143 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 SPXQ9BT56 116 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 Q8TCH9 128 aa12.74□□□□□ -0.37
COL17A1-202ENST00000369733 TRAV26-2A0A0B4J265 109 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 NDUFS7O75251 213 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 LINC00158P58513 81 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 Q6ZSR3 168 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 DENND4CQ5VZ89 1909 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 COL8A2P25067 703 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 STHQ8IWL8 128 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 ZNF688P0C7X2 276 aa12.73□□□□□ -0.37
COL17A1-202ENST00000369733 RNASE8Q8TDE3 154 aaKnown RBP12.73□□□□□ -0.37
COL17A1-202ENST00000369733 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 U3KQA8 63 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 TAL2Q16559 108 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 TRIOBPQ9H2D6 2365 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 NDUFB8O95169 186 aa12.72□□□□□ -0.37
COL17A1-202ENST00000369733 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
COL17A1-202ENST00000369733 CRPP02741 224 aa12.71□□□□□ -0.37
COL17A1-202ENST00000369733 FRMPD3Q5JV73 1810 aa12.71□□□□□ -0.38
COL17A1-202ENST00000369733 LGALS1P09382 135 aaKnown RBP12.71□□□□□ -0.38
COL17A1-202ENST00000369733 H3BMM0 161 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 RASL10AQ92737 203 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 VGLL1Q99990 258 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 PRADC1Q9BSG0 188 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 TCF15Q12870 199 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 GATD1Q8NB37 220 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 OR11H6Q8NGC7 330 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
COL17A1-202ENST00000369733 PMVKQ15126 192 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms