RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 I3L2K1 104 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 FCN3O75636 299 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 HLA-DRB4P13762 266 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 NMUP48645 174 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 DLX6P56179 175 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 NUP37Q8NFH4 326 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 SIGLEC9Q9Y336 463 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 HLA-DRB4X5D2U9 266 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 ACACBO00763 2458 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 CADP27708 2225 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 TMEM8BA6NDV4 472 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 TEX22C9J3V5 150 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 PPIAL4GP0DN37 164 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 PDE6HQ13956 83 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 CLEC2AQ6UVW9 174 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 SRSF8Q9BRL6 282 aaKnown RBP13.72□□□□□ -0.21
CHTOP-203ENST00000368690 TMEM133Q9H2Q1 129 aa13.72□□□□□ -0.21
CHTOP-203ENST00000368690 TMEM213A2RRL7 107 aa13.71□□□□□ -0.21
CHTOP-203ENST00000368690 IGKV1-17P01599 117 aa13.71□□□□□ -0.21
CHTOP-203ENST00000368690 VGLL1Q99990 258 aa13.71□□□□□ -0.21
CHTOP-203ENST00000368690 TPPP3Q9BW30 176 aa13.71□□□□□ -0.21
CHTOP-203ENST00000368690 NBASA2RRP1 2371 aa13.71□□□□□ -0.21
CHTOP-203ENST00000368690 COL6A6A6NMZ7 2263 aa13.71□□□□□ -0.22
CHTOP-203ENST00000368690 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.22
CHTOP-203ENST00000368690 WI2-2373I1.2A0A1W2PRP0 233 aa13.71□□□□□ -0.22
CHTOP-203ENST00000368690 TNFRSF13BO14836 293 aaPredicted RBP13.71□□□□□ -0.22
CHTOP-203ENST00000368690 MRPS12O15235 138 aaKnown RBP13.71□□□□□ -0.22
CHTOP-203ENST00000368690 ENSAO43768 121 aaKnown RBP13.71□□□□□ -0.22
CHTOP-203ENST00000368690 SRSF1Q07955 248 aaKnown RBP eCLIP13.71□□□□□ -0.22
CHTOP-203ENST00000368690 SPOCK3Q9BQ16 436 aa13.71□□□□□ -0.22
CHTOP-203ENST00000368690 SMG1Q96Q15 3661 aaKnown RBP13.7□□□□□ -0.22
CHTOP-203ENST00000368690 ARFGEF3Q5TH69 2177 aa13.7□□□□□ -0.22
CHTOP-203ENST00000368690 NDUFB3O43676 98 aa13.7□□□□□ -0.22
CHTOP-203ENST00000368690 FAM27E3Q08E93 113 aa13.7□□□□□ -0.22
CHTOP-203ENST00000368690 PLGLAQ15195 96 aa13.7□□□□□ -0.22
CHTOP-203ENST00000368690 S100A7AQ86SG5 101 aa13.7□□□□□ -0.22
CHTOP-203ENST00000368690 BCL6BQ8N143 479 aaPredicted RBP13.7□□□□□ -0.22
CHTOP-203ENST00000368690 PHLDA1Q8WV24 401 aaPredicted RBP13.7□□□□□ -0.22
CHTOP-203ENST00000368690 KALRNO60229 2985 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 SIGMAR1Q99720 223 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 TM2D2Q9BX73 214 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 PPIAL4EA0A075B759 164 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 TEX48A0A1B0GUV7 120 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 PPIAL4FP0DN26 164 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 CKS2P33552 79 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 TMEM155Q4W5P6 130 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 PRSS57Q6UWY2 283 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 FOXI2Q6ZQN5 318 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 PLXNB1O43157 2135 aa13.69□□□□□ -0.22
CHTOP-203ENST00000368690 PPIAL4CA0A0B4J2A2 164 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 F8W1H4 67 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 SH2D1AO60880 128 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 NPYP01303 97 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 RBP4P02753 201 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 EVI2AP22794 236 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 CD40P25942 277 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
CHTOP-203ENST00000368690 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
CHTOP-203ENST00000368690 PPP1R27Q86WC6 154 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 C8orf49Q96NF6 230 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 HHLA3Q9XRX5 114 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 C17orf100A8MU93 164 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 J3QR89 54 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 IGHV1-8P0DP01 117 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 GCSHP23434 173 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 FCGR2BP31994 310 aaPredicted RBP13.68□□□□□ -0.22
CHTOP-203ENST00000368690 FXYD2P54710 66 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 CCL8P80075 99 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 CHAC1Q9BUX1 264 aa13.68□□□□□ -0.22
CHTOP-203ENST00000368690 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
CHTOP-203ENST00000368690 FCER1GP30273 86 aa13.67□□□□□ -0.22
CHTOP-203ENST00000368690 ODF1Q14990 250 aa13.67□□□□□ -0.22
CHTOP-203ENST00000368690 CD300EQ496F6 205 aaPredicted RBP13.67□□□□□ -0.22
CHTOP-203ENST00000368690 MAP1LC3AQ9H492 121 aa13.67□□□□□ -0.22
CHTOP-203ENST00000368690 AAMDCQ9H7C9 122 aa13.67□□□□□ -0.22
CHTOP-203ENST00000368690 LOXP28300 417 aaPredicted RBP13.66□□□□□ -0.22
CHTOP-203ENST00000368690 TAL2Q16559 108 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 VKORC1Q9BQB6 163 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 ADGRG4Q8IZF6 3080 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 E9PLD3 99 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
CHTOP-203ENST00000368690 KAAG1Q9UBP8 84 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 SELENOKQ9Y6D0 94 aa13.66□□□□□ -0.22
CHTOP-203ENST00000368690 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 CCL21O00585 134 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 IGLC6P0CF74 106 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 AZU1P20160 251 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 ZNF562Q6V9R5 426 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 CEND1Q8N111 149 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 RNF5Q99942 180 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 POLEQ07864 2286 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 GNG7O60262 68 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 ATP5LO75964 103 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 APELAP0DMC3 54 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms