RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 CST11Q9H112 138 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 PYCARDQ9ULZ3 195 aa0.06□□□□□ -2.4
RNU4-1-201ENST00000363925 SULT1C4O75897 302 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 ATP5HO75947 161 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 ATG12O94817 140 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 MT-ND6P03923 174 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 TRGC2P03986 189 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 IFNA6P05013 189 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 MRPS25P82663 173 aaKnown RBP0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 NEDD8Q15843 81 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 C5orf17Q8NAS9 161 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 SSR3Q9UNL2 185 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 MEGF8Q7Z7M0 2845 aa0.05□□□□□ -2.4
RNU4-1-201ENST00000363925 ADGRL3Q9HAR2 1447 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 TPRP12270 2363 aaKnown RBP0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 IGHV3-33P01772 117 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 CYBAP13498 195 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 PHBP35232 272 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 CAV3P56539 151 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 PRR15Q8IV56 129 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 NEK7Q8TDX7 302 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 AP1S3Q96PC3 154 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 GPX7Q96SL4 187 aaPredicted RBP0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 NAT8BQ9UHF3 227 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 TPRKBQ9Y3C4 175 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 UHRF1BP1Q6BDS2 1440 aa0.04□□□□□ -2.4
RNU4-1-201ENST00000363925 PCF11O94913 1555 aaKnown RBP0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 LY6G6CO95867 125 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 C1QBP02746 253 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 ERVS71-1P61550 626 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 GRPEL2Q8TAA5 225 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 MALSU1Q96EH3 234 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 EFCAB11Q9BUY7 163 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 PRNDQ9UKY0 176 aa0.03□□□□□ -2.4
RNU4-1-201ENST00000363925 ZFYVE26Q68DK2 2539 aa0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 TRAV5A0A0B4J249 113 aa0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 C5orf58C9J3I9 102 aa0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 CTXN2P0C2S0 81 aa0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 RPS3P23396 243 aaKnown RBP eCLIP0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 HBBP68871 147 aa0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 C10orf111Q8N326 155 aa0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 CST7O76096 145 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 PDE6GP18545 87 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 HSD11B1P28845 292 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 SNRPD3P62318 126 aaKnown RBP0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 FADDQ13158 208 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 SPINK13Q1W4C9 94 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 C1orf140Q5VVS0 124 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 HACD4Q5VWC8 232 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 ZCCHC23Q6ZST2 131 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 OR4C12Q96R67 309 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 LYRM2Q9NU23 88 aaPredicted RBP0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 SS18L2Q9UHA2 77 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 ASB4Q9Y574 426 aa0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 A0A0J9YY99 117 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 C3orf85A0A1B0GTC6 90 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 NCAPD3P42695 1498 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 RPL35P42766 123 aaKnown RBP0□□□□□ -2.41
RNU4-1-201ENST00000363925 LYG2Q86SG7 212 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 OR13C6PQ8NH95 151 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 LPAR5Q9H1C0 372 aa0□□□□□ -2.41
RNU4-1-201ENST00000363925 DMBT1Q9UGM3 2413 aaPredicted RBP0□□□□□ -2.41
RNU4-1-201ENST00000363925 LRP1Q07954 4544 aaKnown RBP-0□□□□□ -2.41
RNU4-1-201ENST00000363925 MYH2Q9UKX2 1941 aa-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 IGSF10Q6WRI0 2623 aa-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 ARF6P62330 175 aa-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 OR5AK2Q8NH90 309 aa-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 OR2H1Q9GZK4 316 aa-0.01□□□□□ -2.41
RNU4-1-201ENST00000363925 NCOR2Q9Y618 2525 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 CAMSAP2Q08AD1 1489 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 BBIP1A8MTZ0 92 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 ZNF56Q15929 161 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 GLYATL3Q5SZD4 288 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 XAF1Q6GPH4 301 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 C3orf62Q6ZUJ4 267 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 MNS1Q8NEH6 495 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 SH3BGRL3Q9H299 93 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 NINQ8N4C6 2090 aa-0.02□□□□□ -2.41
RNU4-1-201ENST00000363925 ATG2AQ2TAZ0 1938 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 RBBP6Q7Z6E9 1792 aaKnown RBP-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 DSPPQ9NZW4 1301 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 A0A1W2PRS3 328 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 TMEM210A6NLX4 147 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 FXYD1O00168 92 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 FABP4P15090 132 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 MRPS36P82909 103 aaKnown RBP-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 POU6F1Q14863 301 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 RTL8BQ17RB0 113 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 FKBP1CQ5VVH2 108 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 OR4B1Q8NGF8 309 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 RTL8AQ9BWD3 113 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 MED11Q9P086 117 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 TRPM7Q96QT4 1865 aa-0.03□□□□□ -2.41
RNU4-1-201ENST00000363925 CD109Q6YHK3 1445 aa-0.04□□□□□ -2.42
RNU4-1-201ENST00000363925 LOC107984156A0A0G2JMH3 177 aa-0.04□□□□□ -2.42
RNU4-1-201ENST00000363925 H3BQV1 296 aa-0.04□□□□□ -2.42
RNU4-1-201ENST00000363925 KPNA4O00629 521 aaPredicted RBP-0.04□□□□□ -2.42
RNU4-1-201ENST00000363925 SPINK1P00995 79 aa-0.04□□□□□ -2.42
RNU4-1-201ENST00000363925 FABP2P12104 132 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms