RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 UBE2L6O14933 153 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 NPPCP23582 126 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 FLVCR1-AS1Q8TAF5 88 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 SIT1Q9Y3P8 196 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 C10orf55Q5SWW7 151 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 PMS2CLQ68D20 193 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV2-40A0A087WW87 121 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV5-10-1A0A0J9YXX1 117 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV2D-40P01614 121 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-203ENST00000358544 FOXF2Q12947 444 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 ANXA2RQ3ZCQ2 193 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 RPP25Q9BUL9 199 aaKnown RBP4.97□□□□□ -1.61
VPS13B-203ENST00000358544 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 CCL8P80075 99 aa4.96□□□□□ -1.61
VPS13B-203ENST00000358544 ATP6V0E2Q8NHE4 81 aa4.96□□□□□ -1.61
VPS13B-203ENST00000358544 LINC01565O15544 149 aa4.96□□□□□ -1.61
VPS13B-203ENST00000358544 ZNRF1Q8ND25 227 aa4.96□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV3-49A0A0A0MS15 119 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 LINC00473A8K010 186 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 SHANK2-AS3Q9BTD1 123 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 CELA3BP08861 270 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 HLA-DMBP28068 263 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 Q8TAT8 98 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 CLPSP04118 112 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV1OR15-9A0A0B4J2B8 117 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 TM4SF5O14894 197 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 Q6ZUT4 128 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 LINC00173Q6ZV60 143 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 COX6A1P12074 109 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF747Q9BV97 191 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 PRSS46E5RG02 174 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 WFDC2Q14508 124 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 EXOC3-AS1Q8N2X6 119 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 FAM216BQ8N7L0 139 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 LINC00479Q96M42 142 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 A0A1W2PR77 199 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 FAM214BQ7L5A3 538 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 SSC4DQ8WTU2 575 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV3-35A0A0C4DH35 117 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV3-66A0A0C4DH42 116 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV1-39P01597 117 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV1D-39P04432 117 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 SPANXB1Q9NS25 103 aaPredicted RBP4.96□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF831Q5JPB2 1677 aa4.96□□□□□ -1.62
VPS13B-203ENST00000358544 KIAA1549LQ6ZVL6 1849 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1BA6NDE4 496 aaKnown RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1EA6NEQ0 496 aaKnown RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 NPYP01303 97 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1DP0C7P1 496 aaKnown RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1A1P0DJD3 496 aaKnown RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1CP0DJD4 496 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 HIST1H4AP62805 103 aaKnown RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 HERV-K104P63124 156 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 PCOLCEQ15113 449 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 ZC2HC1AQ96GY0 325 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 WIPF3A6NGB9 483 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV3-23P01764 117 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV3-64A0A075B6Q5 118 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 ZIC4Q8N9L1 334 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 NPIPB5A8MRT5 1133 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 PF4V1P10720 104 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 Q6P435 159 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 NEGR1Q7Z3B1 354 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 LINC00312Q9Y6C7 94 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 CLUHP3Q96NS8 147 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 SLC25A16P16260 332 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV3OR2-268A0A0C4DH90 116 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 WNT2P09544 360 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 HLA-DRB4P13762 266 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 HLA-DRB4X5D2U9 266 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 CRPP02741 224 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 DYNLRB2Q8TF09 96 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 H0YJW9 148 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 CCL4P13236 92 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 APOBEC3AP31941 199 aaPredicted RBP4.95□□□□□ -1.62
VPS13B-203ENST00000358544 C16orf97H3BN30 126 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 CECR9P0C854 216 aa4.95□□□□□ -1.62
VPS13B-203ENST00000358544 RFPL3SP0C7P2 107 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 FXYD2P54710 66 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 EFNA2O43921 213 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 MRPL51Q4U2R6 128 aaKnown RBP4.94□□□□□ -1.62
VPS13B-203ENST00000358544 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 FAM106CPP0CH98 169 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 TIMM21Q9BVV7 248 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 SPAARA0A1B0GVQ0 90 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 AHRRA9YTQ3 701 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 CD24P25063 80 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 SYNJ2BPP57105 145 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 RNASE2P10153 161 aaKnown RBP4.94□□□□□ -1.62
VPS13B-203ENST00000358544 FAM106AQ4KMX7 169 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 MORN5Q5VZ52 161 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 SHISA9B4DS77 424 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 TFF1P04155 84 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms