RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 CBLN2Q8IUK8 224 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 ARL6IP6Q8N6S5 226 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 TUBA4BQ9H853 241 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 TMEM242Q9NWH2 141 aa13.74□□□□□ -0.21
SMARCD3-202ENST00000356800 FOLR2P14207 255 aa13.73□□□□□ -0.21
SMARCD3-202ENST00000356800 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
SMARCD3-202ENST00000356800 IGF2BP2-AS1Q96M15 143 aa13.73□□□□□ -0.21
SMARCD3-202ENST00000356800 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
SMARCD3-202ENST00000356800 ZNF331Q9NQX6 463 aaPredicted RBP13.73□□□□□ -0.21
SMARCD3-202ENST00000356800 IGFL4Q6B9Z1 124 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 SLC50A1Q9BRV3 221 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 ISLRO14498 428 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 MT-ND4LP03901 98 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 CSN3P07498 182 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 ISOC2Q96AB3 205 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 CITED1Q99966 193 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 CTDSP1Q9GZU7 261 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 PEMTQ9UBM1 199 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 MLXQ9UH92 298 aa13.72□□□□□ -0.21
SMARCD3-202ENST00000356800 CXorf65A6NEN9 183 aa13.71□□□□□ -0.21
SMARCD3-202ENST00000356800 HLA-DMBP28068 263 aa13.71□□□□□ -0.21
SMARCD3-202ENST00000356800 BMI1P35226 326 aa13.71□□□□□ -0.21
SMARCD3-202ENST00000356800 RNF212Q495C1 297 aa13.71□□□□□ -0.21
SMARCD3-202ENST00000356800 TCF24Q7RTU0 167 aa13.71□□□□□ -0.21
SMARCD3-202ENST00000356800 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 TRAV34A0A0B4J273 112 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 SERTM2A0A1B0GWG4 89 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 DIRC3C9JPN6 131 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 M0R3E3 92 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 PRB4P10163 310 aaPredicted RBP13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 CSN1S1P47710 185 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 UBE2G1P62253 170 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 RPH3ALQ9UNE2 315 aa13.7□□□□□ -0.22
SMARCD3-202ENST00000356800 TRBV6-1A0A0K0K1D8 114 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 K7EN84 100 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 SOCS3O14543 225 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 GOLT1AQ6ZVE7 132 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 TMEM75Q8N9X5 138 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 ANAPC16Q96DE5 110 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 IGKV3-7A0A075B6H7 116 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 K7EQM0 130 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 RPL11P62913 178 aaKnown RBP13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 RNF182Q8N6D2 247 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
SMARCD3-202ENST00000356800 OVOL1O14753 267 aa13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 GCGP01275 180 aa13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 LTAP01374 205 aa13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 IGLV2-11P01706 119 aa13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 MRPL53Q96EL3 112 aaKnown RBP13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 SFRP2Q96HF1 295 aa13.68□□□□□ -0.22
SMARCD3-202ENST00000356800 M0QZ24 198 aa13.67□□□□□ -0.22
SMARCD3-202ENST00000356800 PPP1R2P9O14990 202 aa13.67□□□□□ -0.22
SMARCD3-202ENST00000356800 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 PSG3Q16557 428 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 GBGT1Q8N5D6 347 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 C15orf54Q8N8G6 183 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 MLST8Q9BVC4 326 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 FBLL1A6NHQ2 334 aaKnown RBP13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 H7BYZ3 331 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 Q86TA4 180 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 DCANP1Q8TF63 244 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 C16orf92Q96LL3 132 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 C20orf173Q96LM9 149 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 MS4A6AQ9H2W1 248 aa13.66□□□□□ -0.22
SMARCD3-202ENST00000356800 TRAV8-1A0A0A6YYK1 113 aa13.65□□□□□ -0.22
SMARCD3-202ENST00000356800 SAMD13Q5VXD3 122 aa13.65□□□□□ -0.22
SMARCD3-202ENST00000356800 SGK494Q96LW2 274 aa13.65□□□□□ -0.22
SMARCD3-202ENST00000356800 YPEL4Q96NS1 127 aa13.65□□□□□ -0.22
SMARCD3-202ENST00000356800 COLCA2A8K830 154 aa13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 FLI1Q01543 452 aaPredicted RBP13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 DEFB114Q30KQ6 69 aa13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 ZFP30Q9Y2G7 519 aa13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 VWFP04275 2813 aa13.64□□□□□ -0.23
SMARCD3-202ENST00000356800 RBAKDNA6NC62 111 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 MGST1P10620 155 aaKnown RBP13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 OR5I1Q13606 314 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 TMEM183AQ8IXX5 376 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 LINC00482Q8N8I6 264 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 SIGLEC8Q9NYZ4 499 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 PSG8Q9UQ74 426 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 IGKV2-40A0A087WW87 121 aaPredicted RBP13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 IGKV2D-40P01614 121 aaPredicted RBP13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 TFPI2P48307 235 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 PRNTQ86SH4 94 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 WFDC3Q8IUB2 231 aa13.63□□□□□ -0.23
SMARCD3-202ENST00000356800 TMEM61Q8N0U2 210 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms