RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CNTFRP26992 372 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 PRB3Q04118 309 aaPredicted RBP12.1□□□□□ -0.47
LMNA-201ENST00000347559 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 LOC400499M0QZD8 3231 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
LMNA-201ENST00000347559 PKDREJQ9NTG1 2253 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 LPAL2Q16609 132 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 TMEM158Q8WZ71 300 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 IGLV1-44P01699 117 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
LMNA-201ENST00000347559 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 SCNM1Q9BWG6 230 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 ZNF71Q9NQZ8 489 aaPredicted RBP12.09□□□□□ -0.47
LMNA-201ENST00000347559 S4R3C0 116 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 TM4SF5O14894 197 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
LMNA-201ENST00000347559 MRPL35Q9NZE8 188 aaKnown RBP12.09□□□□□ -0.47
LMNA-201ENST00000347559 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 PRO0461Q9UI25 63 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
LMNA-201ENST00000347559 CEP250Q9BV73 2442 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 NDUFA3O95167 84 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 CCL8P80075 99 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
LMNA-201ENST00000347559 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 SIT1Q9Y3P8 196 aa12.08□□□□□ -0.48
LMNA-201ENST00000347559 IGKV2-40A0A087WW87 121 aaPredicted RBP12.07□□□□□ -0.48
LMNA-201ENST00000347559 IGKV2D-40P01614 121 aaPredicted RBP12.07□□□□□ -0.48
LMNA-201ENST00000347559 FOXI1Q12951 378 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 TMEM164Q5U3C3 297 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 Q8TAT8 98 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 RNF183Q96D59 192 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 TMEM14CQ9P0S9 112 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 GPR179Q6PRD1 2367 aa12.07□□□□□ -0.48
LMNA-201ENST00000347559 DLX1P56177 255 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 PTH2Q96A98 100 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 EGR2P11161 476 aaPredicted RBP12.06□□□□□ -0.48
LMNA-201ENST00000347559 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 NCOR1O75376 2440 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 ORM1P02763 201 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
LMNA-201ENST00000347559 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 C1orf162Q8NEQ5 155 aaPredicted RBP12.05□□□□□ -0.48
LMNA-201ENST00000347559 PIFOQ8TCI5 191 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 AAMDCQ9H7C9 122 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 ZGRF1Q86YA3 2104 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 IL4P05112 153 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 MRGPRG-AS1Q2M3A8 158 aa12.05□□□□□ -0.48
LMNA-201ENST00000347559 KALRNO60229 2985 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 XGP55808 180 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 IGFL4Q6B9Z1 124 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 RPEQ96AT9 228 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 TRBV6-1A0A0K0K1D8 114 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 IGKV1-17P01599 117 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 PSMB2P49721 201 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
LMNA-201ENST00000347559 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
LMNA-201ENST00000347559 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
LMNA-201ENST00000347559 NCBP2LA6PVI3 153 aaKnown RBP12.03□□□□□ -0.48
LMNA-201ENST00000347559 ATP5LO75964 103 aa12.03□□□□□ -0.48
LMNA-201ENST00000347559 SRSF1Q07955 248 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■□□□□ 8.5
LMNA-201ENST00000347559 FHL3Q13643 280 aa12.03□□□□□ -0.48
LMNA-201ENST00000347559 Q6ZUT4 128 aa12.03□□□□□ -0.48
LMNA-201ENST00000347559 SHISA9B4DS77 424 aa12.02□□□□□ -0.48
LMNA-201ENST00000347559 TGFAP01135 160 aa12.02□□□□□ -0.48
LMNA-201ENST00000347559 GLRXP35754 106 aa12.02□□□□□ -0.48
LMNA-201ENST00000347559 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.48
LMNA-201ENST00000347559 RNF185Q96GF1 192 aa12.02□□□□□ -0.48
LMNA-201ENST00000347559 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.48
LMNA-201ENST00000347559 NXT2Q9NPJ8 142 aaKnown RBP12.02□□□□□ -0.48
LMNA-201ENST00000347559 HOXA3O43365 443 aaPredicted RBP12.02□□□□□ -0.49
LMNA-201ENST00000347559 PLGLAQ15195 96 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 TMEM30BQ3MIR4 351 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 PSMG4Q5JS54 123 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 MYOZ3Q8TDC0 251 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 ANAPC13Q9BS18 74 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 FBXL15Q9H469 300 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 A0A1W2PNU3 283 aaPredicted RBP12.02□□□□□ -0.49
LMNA-201ENST00000347559 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
LMNA-201ENST00000347559 KLRD1Q13241 179 aa12.02□□□□□ -0.49
LMNA-201ENST00000347559 RALYQ9UKM9 306 aaKnown RBP12.02□□□□□ -0.49
LMNA-201ENST00000347559 KLK15Q9H2R5 256 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 H3BRN7 92 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 EFNA4P52798 201 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms