RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 ZNF680Q8NEM1 530 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 SLC17A3O00476 420 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 PRAF2O60831 178 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 SNRPCP09234 159 aaKnown RBP11.31□□□□□ -0.6
TRA2B-202ENST00000342294 ANXA7P20073 488 aaKnown RBP11.31□□□□□ -0.6
TRA2B-202ENST00000342294 SLAQ13239 276 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 Q6ZSA8 131 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 HHLA3Q9XRX5 114 aa11.31□□□□□ -0.6
TRA2B-202ENST00000342294 PIGBOS1A0A0B4J2F0 54 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 TCL1AP56279 114 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 FHL2Q14192 279 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 Q8N814 137 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 C8orf49Q96NF6 230 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 ARL6Q9H0F7 186 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 VCX3AQ9NNX9 186 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
TRA2B-202ENST00000342294 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
TRA2B-202ENST00000342294 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
TRA2B-202ENST00000342294 A0A087WXM4 84 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 ANKRD20A5PA0PJZ0 165 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 H3BP45 60 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 K7EPK0 472 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
TRA2B-202ENST00000342294 SAT2Q96F10 170 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-202ENST00000342294 VGLL1Q99990 258 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
TRA2B-202ENST00000342294 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 C7orf71A4D174 169 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 H3BTX0 84 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 CTDSPLO15194 276 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 OXTP01178 125 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 CRYGDP07320 174 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
TRA2B-202ENST00000342294 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
TRA2B-202ENST00000342294 DNAH8Q96JB1 4490 aa11.27□□□□□ -0.6
TRA2B-202ENST00000342294 KLLNB2CW77 178 aa11.27□□□□□ -0.61
TRA2B-202ENST00000342294 IGLC2P0DOY2 106 aa11.27□□□□□ -0.61
TRA2B-202ENST00000342294 KRTAP10-4P60372 401 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-202ENST00000342294 IBA57Q5T440 356 aaKnown RBP11.27□□□□□ -0.61
TRA2B-202ENST00000342294 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
TRA2B-202ENST00000342294 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.61
TRA2B-202ENST00000342294 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
TRA2B-202ENST00000342294 H3BQ15 152 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 K7EQD1 137 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 PSCAO43653 123 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 CD300CQ08708 224 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 CTF1Q16619 201 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 MORN5Q5VZ52 161 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 LINC00305Q7Z4B0 112 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
TRA2B-202ENST00000342294 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
TRA2B-202ENST00000342294 CTDSP2O14595 271 aa11.25□□□□□ -0.61
TRA2B-202ENST00000342294 SRIP30626 198 aa11.25□□□□□ -0.61
TRA2B-202ENST00000342294 TMEM128Q5BJH2 165 aa11.25□□□□□ -0.61
TRA2B-202ENST00000342294 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
TRA2B-202ENST00000342294 E5RGE8 158 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 CCNKO75909 580 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 ID3Q02535 119 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 NPVFQ9HCQ7 196 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
TRA2B-202ENST00000342294 MPDU1O75352 247 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 ZNF415Q09FC8 603 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 OPCMLQ14982 345 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
TRA2B-202ENST00000342294 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
TRA2B-202ENST00000342294 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
TRA2B-202ENST00000342294 RGS5O15539 181 aa11.22□□□□□ -0.61
TRA2B-202ENST00000342294 GYPEP15421 78 aa11.22□□□□□ -0.61
TRA2B-202ENST00000342294 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
TRA2B-202ENST00000342294 RRAS2P62070 204 aaPredicted RBP11.22□□□□□ -0.61
TRA2B-202ENST00000342294 ERCC8Q13216 396 aa11.22□□□□□ -0.61
TRA2B-202ENST00000342294 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
TRA2B-202ENST00000342294 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 GOSR2O14653 212 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 HOXB5P09067 269 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRA2B-202ENST00000342294 IL18Q14116 193 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 GUK1Q16774 197 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
TRA2B-202ENST00000342294 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
TRA2B-202ENST00000342294 RABL2AQ9UBK7 228 aaPredicted RBP11.21□□□□□ -0.61
TRA2B-202ENST00000342294 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
TRA2B-202ENST00000342294 ZNF253O75346 499 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms