RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
TDP2-201ENST00000341060 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
TDP2-201ENST00000341060 LINC00173Q6ZV60 143 aa11.36□□□□□ -0.59
TDP2-201ENST00000341060 COX8CQ7Z4L0 72 aa11.36□□□□□ -0.59
TDP2-201ENST00000341060 IGHV3-23P01764 117 aa11.36□□□□□ -0.59
TDP2-201ENST00000341060 A0A1W2PPR1 153 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 TFPI2P48307 235 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 ZNF138P52744 262 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 STPG4Q8N801 248 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 Q8N9W7 124 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
TDP2-201ENST00000341060 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
TDP2-201ENST00000341060 FAM106CPP0CH98 169 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 TMUB1Q9BVT8 246 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
TDP2-201ENST00000341060 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
TDP2-201ENST00000341060 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 SH2D1AO60880 128 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
TDP2-201ENST00000341060 CSN3P07498 182 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 PRR25Q96S07 402 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 MED13LQ71F56 2210 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 NDUFS7O75251 213 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 GNLYP22749 145 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 SMAD5-AS1Q9Y6J3 95 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 FLNCQ14315 2725 aa11.33□□□□□ -0.6
TDP2-201ENST00000341060 IGHV2-70DA0A0C4DH43 119 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 S100A7P31151 101 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 UBE2E1P51965 193 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
TDP2-201ENST00000341060 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
TDP2-201ENST00000341060 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 IGHG4P01861 327 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 PRB1P04280 392 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 NPSP0C0P6 89 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
TDP2-201ENST00000341060 C15orf32Q32M92 178 aa11.31□□□□□ -0.6
TDP2-201ENST00000341060 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
TDP2-201ENST00000341060 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
TDP2-201ENST00000341060 TMSB15BA0A087X1C1 80 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 TMEM213A2RRL7 107 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 GPR183P32249 361 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
TDP2-201ENST00000341060 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 UNQ5815/PRO19632Q6UWF5 114 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 Q8TAT8 98 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 VGLL1Q99990 258 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 U3KQK5 164 aa11.3□□□□□ -0.6
TDP2-201ENST00000341060 MYO18BQ8IUG5 2567 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 D6R8Y8 96 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 BMI1P35226 326 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 SAA4P35542 130 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 RAB9AP51151 201 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 EFNA4P52798 201 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 A0A087X0K7 114 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
TDP2-201ENST00000341060 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
TDP2-201ENST00000341060 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
TDP2-201ENST00000341060 IGHV3-35A0A0C4DH35 117 aa11.28□□□□□ -0.6
TDP2-201ENST00000341060 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
TDP2-201ENST00000341060 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
TDP2-201ENST00000341060 RHOGP84095 191 aa11.28□□□□□ -0.6
TDP2-201ENST00000341060 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
TDP2-201ENST00000341060 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
TDP2-201ENST00000341060 BUB3O43684 328 aa11.27□□□□□ -0.6
TDP2-201ENST00000341060 IGLC6P0CF74 106 aa11.27□□□□□ -0.6
TDP2-201ENST00000341060 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.6
TDP2-201ENST00000341060 PRELID3AQ96N28 172 aa11.27□□□□□ -0.6
TDP2-201ENST00000341060 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.6
TDP2-201ENST00000341060 ZFHX3Q15911 3703 aa11.27□□□□□ -0.61
TDP2-201ENST00000341060 A0A096LNJ9 63 aa11.27□□□□□ -0.61
TDP2-201ENST00000341060 H0Y8G0 127 aa11.27□□□□□ -0.61
TDP2-201ENST00000341060 CLEC3BP05452 202 aa11.27□□□□□ -0.61
TDP2-201ENST00000341060 LMO4P61968 165 aa11.27□□□□□ -0.61
TDP2-201ENST00000341060 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms