RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 C16orf92Q96LL3 132 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
CBX3-201ENST00000337620 C9JCJ5 164 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 FOLR2P14207 255 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 TAS2R60P59551 318 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
CBX3-201ENST00000337620 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
CBX3-201ENST00000337620 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
CBX3-201ENST00000337620 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
CBX3-201ENST00000337620 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
CBX3-201ENST00000337620 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 B4DEV8 164 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 K7EQM0 130 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 M0QZ24 198 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 BAGE2Q86Y30 109 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 IGF2BP2-AS1Q96M15 143 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 KLF12Q9Y4X4 402 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 FOXL1Q12952 345 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 FHL3Q13643 280 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 MLXQ9UH92 298 aa11.12□□□□□ -0.63
CBX3-201ENST00000337620 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CBX3-201ENST00000337620 MGST1P10620 155 aaKnown RBP11.11□□□□□ -0.63
CBX3-201ENST00000337620 ADAMTSL5Q6ZMM2 481 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 WFDC3Q8IUB2 231 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 MAST4O15021 2626 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 IGKV2-40A0A087WW87 121 aaPredicted RBP11.11□□□□□ -0.63
CBX3-201ENST00000337620 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 K7EN84 100 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 IGKV2D-40P01614 121 aaPredicted RBP11.11□□□□□ -0.63
CBX3-201ENST00000337620 RNF212Q495C1 297 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.11□□□□□ -0.63
CBX3-201ENST00000337620 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
CBX3-201ENST00000337620 IGLV2-8P01709 118 aa11.1□□□□□ -0.63
CBX3-201ENST00000337620 OR5I1Q13606 314 aa11.1□□□□□ -0.63
CBX3-201ENST00000337620 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 DNASE2O00115 360 aaPredicted RBP11.09□□□□□ -0.63
CBX3-201ENST00000337620 SOCS3O14543 225 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 CSN3P07498 182 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 TFPI2P48307 235 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 PSG3Q16557 428 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 ARL6IP6Q8N6S5 226 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 MS4A6AQ9H2W1 248 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 WNK1Q9H4A3 2382 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 A0A087WWC5 75 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 TSPAN4O14817 238 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
CBX3-201ENST00000337620 C20orf173Q96LM9 149 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 ASCL2Q99929 193 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 SMCO4Q9NRQ5 59 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
CBX3-201ENST00000337620 SERTM2A0A1B0GWG4 89 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 OVOL1O14753 267 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 LTAP01374 205 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 Q86TA4 180 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 SFRP2Q96HF1 295 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 DCANP1Q8TF63 244 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 MRPL53Q96EL3 112 aaKnown RBP11.08□□□□□ -0.64
CBX3-201ENST00000337620 VGLL1Q99990 258 aa11.08□□□□□ -0.64
CBX3-201ENST00000337620 ERVFC1-1P60608 527 aa11.07□□□□□ -0.64
CBX3-201ENST00000337620 ERCC8Q13216 396 aa11.07□□□□□ -0.64
CBX3-201ENST00000337620 PRR27Q6MZM9 219 aa11.07□□□□□ -0.64
CBX3-201ENST00000337620 TMA7Q9Y2S6 64 aaKnown RBP11.07□□□□□ -0.64
CBX3-201ENST00000337620 GCGP01275 180 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 ID1P41134 155 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 ANAPC16Q96DE5 110 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 TRBV6-1A0A0K0K1D8 114 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 H7BYZ3 331 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 RBPMS2Q6ZRY4 209 aaKnown RBP11.06□□□□□ -0.64
CBX3-201ENST00000337620 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
CBX3-201ENST00000337620 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
CBX3-201ENST00000337620 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 CTAG1AP78358 180 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 SAMD13Q5VXD3 122 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 Q8TAT8 98 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 TMEM242Q9NWH2 141 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 ZFP30Q9Y2G7 519 aa11.05□□□□□ -0.64
CBX3-201ENST00000337620 URGCP-MRPS24S4R325 110 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms