RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 ATP5L2Q7Z4Y8 100 aa13.67□□□□□ -0.22
PRKCD-201ENST00000330452 OR5AN1Q8NGI8 311 aa13.67□□□□□ -0.22
PRKCD-201ENST00000330452 SMIM9A6NGZ8 99 aa13.66□□□□□ -0.22
PRKCD-201ENST00000330452 C8orf46Q8TAG6 207 aa13.66□□□□□ -0.22
PRKCD-201ENST00000330452 SRRM4A7MD48 611 aaKnown RBP13.66□□□□□ -0.22
PRKCD-201ENST00000330452 GATA4P43694 442 aa13.66□□□□□ -0.22
PRKCD-201ENST00000330452 ZCCHC24Q8N2G6 241 aaKnown RBP13.66□□□□□ -0.22
PRKCD-201ENST00000330452 AJUBAQ96IF1 538 aa13.66□□□□□ -0.22
PRKCD-201ENST00000330452 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
PRKCD-201ENST00000330452 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 RAI1Q7Z5J4 1906 aaPredicted RBP13.65□□□□□ -0.22
PRKCD-201ENST00000330452 PRRG2O14669 202 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 CSN1S1P47710 185 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCD-201ENST00000330452 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 RND1Q92730 232 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
PRKCD-201ENST00000330452 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 TMEM8BA6NDV4 472 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 FCN3O75636 299 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 MLANAQ16655 118 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 MEIG1Q5JSS6 88 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 CFAP126Q5VTH2 177 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 RAB9BQ9NP90 201 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 HBBP68871 147 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 Q8NA96 180 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
PRKCD-201ENST00000330452 NPIPB6E9PJ23 425 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 IFITM1P13164 125 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 CCL8P80075 99 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 GAGE2BQ13066 116 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 GAGE2EQ4V326 116 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 FAM231DQ6ZW35 169 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 GAGE2DQ9UEU5 116 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 ANKHD1Q8IWZ3 2542 aaKnown RBP13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PRR20EP86478 221 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PRR20CP86479 221 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PRR20DP86480 221 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PRR20BP86481 221 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PRR20AP86496 221 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 IGFL3Q6UXB1 125 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 PLEKHA3Q9HB20 300 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 HIGD1BQ9P298 99 aa13.63□□□□□ -0.23
PRKCD-201ENST00000330452 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 CD40P25942 277 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 TTC32Q5I0X7 151 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 DYSFO75923 2080 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 CSN3P07498 182 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 LGALS9BQ3B8N2 356 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
PRKCD-201ENST00000330452 UPK2O00526 184 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 LTAP01374 205 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 TMEM78Q5T7P6 136 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 SLC25A48Q6ZT89 311 aaKnown RBP13.61□□□□□ -0.23
PRKCD-201ENST00000330452 CEND1Q8N111 149 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 PPDPFLQ8WWR9 84 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
PRKCD-201ENST00000330452 PRNDQ9UKY0 176 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 GGTLC3B5MD39 225 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 PRCDQ00LT1 54 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 POU2AF1Q16633 256 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 RAXQ9Y2V3 346 aa13.61□□□□□ -0.23
PRKCD-201ENST00000330452 RRN3P1Q2M238 152 aa13.6□□□□□ -0.23
PRKCD-201ENST00000330452 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
PRKCD-201ENST00000330452 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
PRKCD-201ENST00000330452 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
PRKCD-201ENST00000330452 TPPP3Q9BW30 176 aa13.6□□□□□ -0.23
PRKCD-201ENST00000330452 AP5S1Q9NUS5 200 aa13.6□□□□□ -0.23
PRKCD-201ENST00000330452 CACNG7P62955 275 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 C3orf36Q3SXR2 165 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 RPEQ96AT9 228 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 DNAJC30Q96LL9 226 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 A0A0G2JNJ9 132 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 CCL3L1P16619 93 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 OR9G1Q8NH87 305 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
PRKCD-201ENST00000330452 Q9UFV3 132 aa13.59□□□□□ -0.23
PRKCD-201ENST00000330452 SOX21Q9Y651 276 aaPredicted RBP13.59□□□□□ -0.23
PRKCD-201ENST00000330452 HRNRQ86YZ3 2850 aaPredicted RBP13.59□□□□□ -0.23
PRKCD-201ENST00000330452 GFRALQ6UXV0 394 aa13.58□□□□□ -0.23
PRKCD-201ENST00000330452 ZNF503Q96F45 646 aa13.58□□□□□ -0.23
PRKCD-201ENST00000330452 ZNF137PP52743 207 aa13.58□□□□□ -0.24
PRKCD-201ENST00000330452 LINC00479Q96M42 142 aa13.58□□□□□ -0.24
PRKCD-201ENST00000330452 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
PRKCD-201ENST00000330452 LINC00574Q9H8X3 128 aa13.58□□□□□ -0.24
PRKCD-201ENST00000330452 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
PRKCD-201ENST00000330452 TRAV4A0A0B4J268 109 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 APOHP02749 345 aaPredicted RBP13.57□□□□□ -0.24
PRKCD-201ENST00000330452 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 SLC25A33Q9BSK2 321 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 TEX36Q5VZQ5 186 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 TMEM167BQ9NRX6 74 aa13.57□□□□□ -0.24
PRKCD-201ENST00000330452 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms