RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 C9orf118A6NHY6 69 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 IGLC6P0CF74 106 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 EGR2P11161 476 aaPredicted RBP14.92□□□□□ -0.02
RTN4-201ENST00000317610 DPM3Q9P2X0 92 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 S4R3C0 116 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 CEP250Q9BV73 2442 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 EP300Q09472 2414 aaPredicted RBP14.92□□□□□ -0.02
RTN4-201ENST00000317610 IGKV2-40A0A087WW87 121 aaPredicted RBP14.92□□□□□ -0.02
RTN4-201ENST00000317610 NPYP01303 97 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 IGKV2D-40P01614 121 aaPredicted RBP14.92□□□□□ -0.02
RTN4-201ENST00000317610 CD3EP07766 207 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 SRSF2Q01130 221 aaKnown RBP14.92□□□□□ -0.02
RTN4-201ENST00000317610 ADAMTSL5Q6ZMM2 481 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 ONECUT1Q9UBC0 465 aa14.92□□□□□ -0.02
RTN4-201ENST00000317610 LINC01546A6NGU7 62 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 RPL7P18124 248 aaKnown RBP14.91□□□□□ -0.02
RTN4-201ENST00000317610 PSMG3-AS1Q96PY0 264 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.91□□□□□ -0.02
RTN4-201ENST00000317610 A1L4Q6 167 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 CKS2P33552 79 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 C5orf64Q2M2E5 130 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 ZNF575Q86XF7 245 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 FER1L6-AS1Q8NA97 138 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 OR4X2Q8NGF9 303 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 ABHD17AQ96GS6 310 aa14.91□□□□□ -0.02
RTN4-201ENST00000317610 GAGE10A6NGK3 116 aa14.9□□□□□ -0.02
RTN4-201ENST00000317610 BMI1P35226 326 aa14.9□□□□□ -0.02
RTN4-201ENST00000317610 IGFBPL1Q8WX77 278 aa14.9□□□□□ -0.02
RTN4-201ENST00000317610 VPS25Q9BRG1 176 aa14.9□□□□□ -0.02
RTN4-201ENST00000317610 PCNX1Q96RV3 2341 aa14.9□□□□□ -0.02
RTN4-201ENST00000317610 NDUFS7O75251 213 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 TTC9CQ8N5M4 171 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 PIFOQ8TCI5 191 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 ZZEF1O43149 2961 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 K7ERU9 68 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 UQCRFS1P47985 274 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 ZNF80P51504 273 aaPredicted RBP14.89□□□□□ -0.03
RTN4-201ENST00000317610 GTF2H5Q6ZYL4 71 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 JMJD8Q96S16 334 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 CNFNQ9BYD5 112 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 THYN1Q9P016 225 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 HILPDAQ9Y5L2 63 aa14.89□□□□□ -0.03
RTN4-201ENST00000317610 SMKR1H3BMG3 65 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 FXYD7P58549 80 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 TWIST1Q15672 202 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 COL25A1Q9BXS0 654 aaPredicted RBP14.88□□□□□ -0.03
RTN4-201ENST00000317610 C21orf62Q9NYP8 219 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 MGAQ8IWI9 3026 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 BSNQ9UPA5 3926 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 IGHG4P01861 327 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 CEACAM3P40198 252 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 KIR3DS1Q14943 382 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 ZNF562Q6V9R5 426 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 SMIM15Q7Z3B0 74 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 RNF185Q96GF1 192 aa14.88□□□□□ -0.03
RTN4-201ENST00000317610 ODF3BA8MYP8 253 aa14.87□□□□□ -0.03
RTN4-201ENST00000317610 ZNF672Q499Z4 452 aaPredicted RBP14.87□□□□□ -0.03
RTN4-201ENST00000317610 SMAD5-AS1Q9Y6J3 95 aa14.87□□□□□ -0.03
RTN4-201ENST00000317610 ARPC1AQ92747 370 aa14.87□□□□□ -0.03
RTN4-201ENST00000317610 AP1S3Q96PC3 154 aa14.87□□□□□ -0.03
RTN4-201ENST00000317610 VGLL1Q99990 258 aa14.87□□□□□ -0.03
RTN4-201ENST00000317610 K7EP34 96 aa14.86□□□□□ -0.03
RTN4-201ENST00000317610 PSMG4Q5JS54 123 aa14.86□□□□□ -0.03
RTN4-201ENST00000317610 Q8TAT8 98 aa14.86□□□□□ -0.03
RTN4-201ENST00000317610 NDPQ00604 133 aa14.86□□□□□ -0.03
RTN4-201ENST00000317610 PCP2Q8IVA1 136 aa14.85□□□□□ -0.03
RTN4-201ENST00000317610 MAP1LC3AQ9H492 121 aa14.85□□□□□ -0.03
RTN4-201ENST00000317610 ZMAT4Q9H898 229 aa14.85□□□□□ -0.03
RTN4-201ENST00000317610 DKK2Q9UBU2 259 aa14.85□□□□□ -0.03
RTN4-201ENST00000317610 H3BUT2 72 aa14.84□□□□□ -0.03
RTN4-201ENST00000317610 A0A0G2JLM5 398 aa14.84□□□□□ -0.03
RTN4-201ENST00000317610 M0R1W7 72 aa14.84□□□□□ -0.03
RTN4-201ENST00000317610 POLEQ07864 2286 aa14.84□□□□□ -0.03
RTN4-201ENST00000317610 DMXL2Q8TDJ6 3036 aa14.84□□□□□ -0.03
RTN4-201ENST00000317610 CTSGP08311 255 aa14.83□□□□□ -0.03
RTN4-201ENST00000317610 LAMA5O15230 3695 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 A0A1W2PRD5 423 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 A0A1W2PRF3 423 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 A0A1W2PRM7 423 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 NMUP48645 174 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 KLRD1Q13241 179 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 HES1Q14469 280 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 PRSS57Q6UWY2 283 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 Q8N6K4 173 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 DMXL1Q9Y485 3027 aa14.83□□□□□ -0.04
RTN4-201ENST00000317610 SCGB2A1O75556 95 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 HLA-DMBP28068 263 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 FCER1GP30273 86 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 TCTAP57738 103 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 ADGRG4Q8IZF6 3080 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 KALRNO60229 2985 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 APC2O95996 2303 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 FABP5P3A8MUU1 101 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 PRTN3P24158 256 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 LINC01559Q495D7 138 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 PRR30Q53SZ7 412 aaPredicted RBP14.82□□□□□ -0.04
RTN4-201ENST00000317610 OR2K2Q8NGT1 345 aa14.82□□□□□ -0.04
RTN4-201ENST00000317610 NXT2Q9NPJ8 142 aaKnown RBP14.82□□□□□ -0.04
RTN4-201ENST00000317610 IGHV3-23P01764 117 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms