RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 DIRC3C9JPN6 131 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 ISLRO14498 428 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 HLA-DMBP28068 263 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 FHL3Q13643 280 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 OCC1Q8TAD7 63 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 AURKAIP1Q9NWT8 199 aaPredicted RBP17.08■□□□□ 0.32
IRF3-201ENST00000309877 PRELID1Q9Y255 219 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 LY96Q9Y6Y9 160 aa17.08■□□□□ 0.32
IRF3-201ENST00000309877 IGKV3-7A0A075B6H7 116 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 KRTAP10-3P60369 221 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 BTN1A1Q13410 526 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 SGK494Q96LW2 274 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 IGF2BP2-AS1Q96M15 143 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 CLEC5AQ9NY25 188 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 LCN12Q6JVE5 192 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 BAGE2Q86Y30 109 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 NDUFA11Q86Y39 141 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 RNF182Q8N6D2 247 aa17.07■□□□□ 0.32
IRF3-201ENST00000309877 TRAV8-2A0A0B4J237 113 aa17.06■□□□□ 0.32
IRF3-201ENST00000309877 SERTM2A0A1B0GWG4 89 aa17.06■□□□□ 0.32
IRF3-201ENST00000309877 ADARB2-AS1A8MUL3 147 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 ZNF705FA8MVS1 300 aaPredicted RBP17.04■□□□□ 0.32
IRF3-201ENST00000309877 PRB4P10163 310 aaPredicted RBP17.04■□□□□ 0.32
IRF3-201ENST00000309877 TMEM75Q8N9X5 138 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 MLXQ9UH92 298 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 A0A087WWC5 75 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 TRAV8-1A0A0A6YYK1 113 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 MT-ND4LP03901 98 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 PSG3Q16557 428 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 TMEM88Q6PEY1 159 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 ADAMTSL5Q6ZMM2 481 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 GBGT1Q8N5D6 347 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 ISOC2Q96AB3 205 aa17.04■□□□□ 0.32
IRF3-201ENST00000309877 MRPL53Q96EL3 112 aaKnown RBP17.04■□□□□ 0.32
IRF3-201ENST00000309877 SOCS3O14543 225 aa17.03■□□□□ 0.32
IRF3-201ENST00000309877 MGST1P10620 155 aaKnown RBP17.03■□□□□ 0.32
IRF3-201ENST00000309877 RNF212Q495C1 297 aa17.03■□□□□ 0.32
IRF3-201ENST00000309877 SAMD13Q5VXD3 122 aa17.03■□□□□ 0.32
IRF3-201ENST00000309877 PRNTQ86SH4 94 aa17.03■□□□□ 0.32
IRF3-201ENST00000309877 IGKV2-40A0A087WW87 121 aaPredicted RBP17.02■□□□□ 0.32
IRF3-201ENST00000309877 K7EN84 100 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 OVOL1O14753 267 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 IGKV2D-40P01614 121 aaPredicted RBP17.02■□□□□ 0.32
IRF3-201ENST00000309877 CSN3P07498 182 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 FLI1Q01543 452 aaPredicted RBP17.02■□□□□ 0.32
IRF3-201ENST00000309877 WFDC3Q8IUB2 231 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 CBLN2Q8IUK8 224 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 NHLRC2Q8NBF2 726 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 SMCO4Q9NRQ5 59 aa17.02■□□□□ 0.32
IRF3-201ENST00000309877 DNASE2O00115 360 aaPredicted RBP17.01■□□□□ 0.31
IRF3-201ENST00000309877 TSPAN4O14817 238 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 LTAP01374 205 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 IGLV2-11P01706 119 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 ID1P41134 155 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 Q86TA4 180 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 DYNLRB2Q8TF09 96 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 MS4A6AQ9H2W1 248 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 PSG8Q9UQ74 426 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 TRBV6-1A0A0K0K1D8 114 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 IGLV2-8P01709 118 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 ZNF738Q8NE65 137 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 SMIM12Q96EX1 92 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 CTDSP1Q9GZU7 261 aa17.01■□□□□ 0.31
IRF3-201ENST00000309877 C2CD3Q4AC94 2353 aa17■□□□□ 0.31
IRF3-201ENST00000309877 OR5I1Q13606 314 aa17■□□□□ 0.31
IRF3-201ENST00000309877 SFRP2Q96HF1 295 aa17■□□□□ 0.31
IRF3-201ENST00000309877 C20orf173Q96LM9 149 aa17■□□□□ 0.31
IRF3-201ENST00000309877 FBLL1A6NHQ2 334 aaKnown RBP16.99■□□□□ 0.31
IRF3-201ENST00000309877 PRAC2D3DTV9 90 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 GCGP01275 180 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 TFPI2P48307 235 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 PAFAH1B2P68402 229 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 DCANP1Q8TF63 244 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 ANAPC16Q96DE5 110 aa16.99■□□□□ 0.31
IRF3-201ENST00000309877 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.98■□□□□ 0.31
IRF3-201ENST00000309877 ZFP30Q9Y2G7 519 aa16.98■□□□□ 0.31
IRF3-201ENST00000309877 SETD2Q9BYW2 2564 aaPredicted RBP16.98■□□□□ 0.31
IRF3-201ENST00000309877 RBAKDNA6NC62 111 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 H7BYZ3 331 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 PPP1R2P9O14990 202 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 RBPMS2Q6ZRY4 209 aaKnown RBP16.97■□□□□ 0.31
IRF3-201ENST00000309877 VGLL1Q99990 258 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 TMEM242Q9NWH2 141 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 ERVFC1-1P60608 527 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 TMEM183AQ8IXX5 376 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 OR10G8Q8NGN5 311 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 BIN3Q9NQY0 253 aa16.97■□□□□ 0.31
IRF3-201ENST00000309877 PRR27Q6MZM9 219 aa16.96■□□□□ 0.31
IRF3-201ENST00000309877 C15orf54Q8N8G6 183 aa16.96■□□□□ 0.31
IRF3-201ENST00000309877 MLST8Q9BVC4 326 aa16.96■□□□□ 0.31
IRF3-201ENST00000309877 K7EQG2 157 aa16.95■□□□□ 0.3
IRF3-201ENST00000309877 PF4P02776 101 aa16.95■□□□□ 0.3
IRF3-201ENST00000309877 SNRPD3P62318 126 aaKnown RBP16.95■□□□□ 0.3
IRF3-201ENST00000309877 ERCC8Q13216 396 aa16.95■□□□□ 0.3
IRF3-201ENST00000309877 DEFB114Q30KQ6 69 aa16.95■□□□□ 0.3
IRF3-201ENST00000309877 TUBA4BQ9H853 241 aa16.95■□□□□ 0.3
IRF3-201ENST00000309877 CXorf65A6NEN9 183 aa16.94■□□□□ 0.3
IRF3-201ENST00000309877 ASCL2Q99929 193 aa16.94■□□□□ 0.3
IRF3-201ENST00000309877 SIGLEC8Q9NYZ4 499 aa16.94■□□□□ 0.3
IRF3-201ENST00000309877 SAPCD1Q5SSQ6 148 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms