RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 SPAG8Q99932 426 aaPredicted RBP16.63■□□□□ 0.25
SH3RF3-201ENST00000309415 MRPL27Q9P0M9 148 aaKnown RBP16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 PFN1P07737 140 aaKnown RBP16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 SRSF4Q08170 494 aaKnown RBP16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 C17orf58Q2M2W7 97 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 KLF12Q9Y4X4 402 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 CEP250Q9BV73 2442 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 VWC2Q2TAL6 325 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 TMEM14BQ9NUH8 114 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 C8orf86Q6ZUL3 223 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 IGLV3-9A0A075B6K5 115 aa16.62■□□□□ 0.25
SH3RF3-201ENST00000309415 CDKN1BP46527 198 aa16.61■□□□□ 0.25
SH3RF3-201ENST00000309415 FAM120AOSQ5T036 256 aa16.61■□□□□ 0.25
SH3RF3-201ENST00000309415 PRB1P04280 392 aa16.61■□□□□ 0.25
SH3RF3-201ENST00000309415 RPL32P62910 135 aaKnown RBP16.61■□□□□ 0.25
SH3RF3-201ENST00000309415 TRBV24-1A0A075B6N3 115 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 IGLV1-44P01699 117 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 LINC00311Q8N616 119 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 THAP8Q8NA92 274 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 KIF26BQ2KJY2 2108 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 SPTBN2O15020 2390 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 SAMD5Q5TGI4 173 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 C8orf49Q96NF6 230 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 Q6ZRM9 215 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 GFRA4Q9GZZ7 299 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 TRAV12-2A0A075B6T6 113 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 WISP1O95388 367 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 VPREB3Q9UKI3 123 aa16.6■□□□□ 0.25
SH3RF3-201ENST00000309415 I3L3M4 83 aa16.59■□□□□ 0.25
SH3RF3-201ENST00000309415 ETV2O00321 342 aaPredicted RBP16.59■□□□□ 0.25
SH3RF3-201ENST00000309415 DEFB112Q30KQ8 113 aa16.59■□□□□ 0.25
SH3RF3-201ENST00000309415 TMEM243Q9BU79 118 aa16.59■□□□□ 0.25
SH3RF3-201ENST00000309415 TNFRSF6BO95407 300 aa16.58■□□□□ 0.25
SH3RF3-201ENST00000309415 VWC2LB2RUY7 222 aa16.58■□□□□ 0.25
SH3RF3-201ENST00000309415 ZNRF2Q8NHG8 242 aa16.58■□□□□ 0.25
SH3RF3-201ENST00000309415 TMEM126AQ9H061 195 aa16.58■□□□□ 0.25
SH3RF3-201ENST00000309415 TICRRQ7Z2Z1 1910 aa16.58■□□□□ 0.25
SH3RF3-201ENST00000309415 TCF15Q12870 199 aa16.58■□□□□ 0.24
SH3RF3-201ENST00000309415 TCF20Q9UGU0 1960 aaKnown RBP16.58■□□□□ 0.24
SH3RF3-201ENST00000309415 CXCL1P09341 107 aa16.58■□□□□ 0.24
SH3RF3-201ENST00000309415 AKAP6Q13023 2319 aa16.58■□□□□ 0.24
SH3RF3-201ENST00000309415 GAGE6Q13070 117 aa16.58■□□□□ 0.24
SH3RF3-201ENST00000309415 GUSBP1Q15486 140 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 FREM3P0C091 2139 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 IGKV1-6A0A0C4DH72 117 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 PMVKQ15126 192 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 DNAJC30Q96LL9 226 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 FNDC1Q4ZHG4 1894 aaPredicted RBP16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 IGHV2-5P01817 119 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 HIST1H4AP62805 103 aaKnown RBP16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 BCL6BQ8N143 479 aaPredicted RBP16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 MEGF9Q9H1U4 602 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 WDR86Q86TI4 376 aa16.57■□□□□ 0.24
SH3RF3-201ENST00000309415 GSN-AS1Q9NRJ2 163 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 TP53TG1Q9Y2A0 90 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 IGHV7-4-1A0A0J9YVY3 117 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 IGF2BP2-AS1Q96M15 143 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 TRBV19A0A075B6N1 114 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 LHBP01229 141 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 COL6A6A6NMZ7 2263 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 LINC00479Q96M42 142 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 SNHG12Q9BXW3 62 aa16.56■□□□□ 0.24
SH3RF3-201ENST00000309415 HOXB4P17483 251 aaPredicted RBP16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 MYO7BQ6PIF6 2116 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 ACACAQ13085 2346 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 ZNF503-AS2A6NEH8 195 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 IGHV4-59P01825 116 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 A0A096LPF7 62 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 H3BUA1 57 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 SLX1AQ9BQ83 275 aa16.55■□□□□ 0.24
SH3RF3-201ENST00000309415 ZNF625Q96I27 306 aaPredicted RBP16.54■□□□□ 0.24
SH3RF3-201ENST00000309415 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.54■□□□□ 0.24
SH3RF3-201ENST00000309415 TMEM141Q96I45 108 aa16.54■□□□□ 0.24
SH3RF3-201ENST00000309415 IGHV3-38A0A0C4DH36 116 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 SHISA9B4DS77 424 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 CCL24O00175 119 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 ANXA2RQ3ZCQ2 193 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 HIST1H2BLQ99880 126 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 ESDP10768 282 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 GRNP28799 593 aaKnown RBP16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 ZNF492Q9P255 531 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 FHL1Q13642 323 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 ZNF114Q8NC26 417 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 TMEM213A2RRL7 107 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 PFN2P35080 140 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 C2orf82Q6UX34 121 aa16.53■□□□□ 0.24
SH3RF3-201ENST00000309415 PRSS46E5RG02 174 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 C9orf66Q5T8R8 295 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 H3BRN7 92 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 TPSG1Q9NRR2 321 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 NDUFS7O75251 213 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 ZC2HC1BQ5TFG8 222 aa16.52■□□□□ 0.24
SH3RF3-201ENST00000309415 hDV102S1A0JD36 115 aa16.52■□□□□ 0.23
SH3RF3-201ENST00000309415 SLAQ13239 276 aa16.52■□□□□ 0.23
SH3RF3-201ENST00000309415 KLF2Q9Y5W3 355 aaPredicted RBP16.51■□□□□ 0.23
SH3RF3-201ENST00000309415 TRAV8-3A0A0A6YYJ7 113 aa16.51■□□□□ 0.23
SH3RF3-201ENST00000309415 NDUFAF3Q9BU61 184 aa16.51■□□□□ 0.23
SH3RF3-201ENST00000309415 KAAG1Q9UBP8 84 aa16.51■□□□□ 0.23
SH3RF3-201ENST00000309415 CHAC1Q9BUX1 264 aa16.51■□□□□ 0.23
SH3RF3-201ENST00000309415 VWA8A3KMH1 1905 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms