RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PRRC2AP48634 2157 aaKnown RBP12.27□□□□□ -0.45
CHAF1A-201ENST00000301280 TRBV9A0A0B4J1U6 114 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 TRAV40A0A0B4J280 105 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 CRYGCP07315 174 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 CRYGBP07316 175 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 GP9P14770 177 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 RHOGP84095 191 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 SPATA12Q7Z6I5 190 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 I3L2K1 104 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 HBBP68871 147 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 PSG8Q9UQ74 426 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 MYCNOSP40205 109 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
CHAF1A-201ENST00000301280 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 K7EQM0 130 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 LINC00614P0C842 121 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 hDV102S1A0JD36 115 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 ATP6V0E1O15342 81 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 CCL25O15444 150 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 PPP1R14DQ9NXH3 145 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 TEX15Q9BXT5 2789 aa12.25□□□□□ -0.45
CHAF1A-201ENST00000301280 FBN2P35556 2912 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 HNRNPA3P51991 378 aaKnown RBP12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 HIF1ANQ9NWT6 349 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 COL5A1-AS1Q5SY13 56 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 OR4B1Q8NGF8 309 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 VGLL1Q99990 258 aa12.24□□□□□ -0.45
CHAF1A-201ENST00000301280 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 PRTN3P24158 256 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 TWIST1Q15672 202 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 MT-ND6P03923 174 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 Q86TA4 180 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
CHAF1A-201ENST00000301280 MBD6Q96DN6 1003 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 EVI2AP22794 236 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 EBLN2Q6P2I7 272 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 UFC1Q9Y3C8 167 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 FAM106CPP0CH98 169 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 ATP5J2P56134 94 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 Q6ZQT7 251 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 FANCD2OSQ96PS1 177 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 C7orf69Q9H7B7 122 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 MSRB1Q9NZV6 116 aa12.22□□□□□ -0.45
CHAF1A-201ENST00000301280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 APOHP02749 345 aaPredicted RBP12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 THYN1Q9P016 225 aa12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 TRBV19A0A075B6N1 114 aa12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 PF4V1P10720 104 aa12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.45
CHAF1A-201ENST00000301280 TMEM189A5PLL7 270 aa12.21□□□□□ -0.46
CHAF1A-201ENST00000301280 PCP4P48539 62 aa12.21□□□□□ -0.46
CHAF1A-201ENST00000301280 COX19Q49B96 90 aa12.21□□□□□ -0.46
CHAF1A-201ENST00000301280 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.46
CHAF1A-201ENST00000301280 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 UCNP55089 124 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 TMEM95Q3KNT9 176 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 FAM106AQ4KMX7 169 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 RBPMS2Q6ZRY4 209 aaKnown RBP12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 SMIM12Q96EX1 92 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 HECTD1Q9ULT8 2610 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 PLP1P60201 277 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 ALKBH7Q9BT30 221 aaPredicted RBP12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
CHAF1A-201ENST00000301280 HOXB4P17483 251 aaPredicted RBP12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 FMC1Q96HJ9 113 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 CCDC144NLQ6NUI1 221 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 RABAC1Q9UI14 185 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 HTN1P15515 57 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 TSPOP30536 169 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
CHAF1A-201ENST00000301280 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 TOMM40O96008 361 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 CFHR4Q92496 578 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 KLK15Q9H2R5 256 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 FAM181BA6NEQ2 426 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 C1RLQ9NZP8 487 aa12.18□□□□□ -0.46
CHAF1A-201ENST00000301280 IGLL1P15814 213 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 OR4C46A6NHA9 309 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms