RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 PAX9P55771 341 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 PROK2Q9HC23 129 aa12.42□□□□□ -0.42
FNDC1-201ENST00000297267 A0A087WX48 190 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 K7EM74 188 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 NXPH4O95158 308 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 EFNA4P52798 201 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 C1orf194Q5T5A4 169 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 ZC2HC1BQ5TFG8 222 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
FNDC1-201ENST00000297267 TOMM40O96008 361 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 ATP5IP56385 69 aaPredicted RBP12.41□□□□□ -0.42
FNDC1-201ENST00000297267 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 CHAC1Q9BUX1 264 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 NDUFS7O75251 213 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 DEFB136Q30KP8 78 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 PLNP26678 52 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 C17orf58Q2M2W7 97 aa12.41□□□□□ -0.42
FNDC1-201ENST00000297267 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 FBLN5Q9UBX5 448 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 NPSP0C0P6 89 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 NRGNQ92686 78 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 MORN5Q5VZ52 161 aa12.4□□□□□ -0.42
FNDC1-201ENST00000297267 DLEU1O43261 78 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE6Q13070 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 ADAMTS9Q9P2N4 1935 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 TRBV7-1A0A0A6YYK4 115 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE7O76087 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 SPINK8P0C7L1 97 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE12FP0CL80 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE12GP0CL81 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE12IP0CL82 117 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE2EQ4V326 116 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 C6orf226Q5I0X4 101 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 GAGE2DQ9UEU5 116 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 VWC2Q2TAL6 325 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 PLXNA2O75051 1894 aa12.39□□□□□ -0.43
FNDC1-201ENST00000297267 IGHV4-4A0A075B6R2 117 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
FNDC1-201ENST00000297267 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 Q6ZWC4 215 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 SLC25A16P16260 332 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
FNDC1-201ENST00000297267 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
FNDC1-201ENST00000297267 LY6G6EA0A0G2JKS1 128 aa12.37□□□□□ -0.43
FNDC1-201ENST00000297267 ATXN8Q156A1 80 aa12.37□□□□□ -0.43
FNDC1-201ENST00000297267 U3KQA8 63 aa12.37□□□□□ -0.43
FNDC1-201ENST00000297267 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
FNDC1-201ENST00000297267 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
FNDC1-201ENST00000297267 FAM90A9PA6NNJ1 464 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
FNDC1-201ENST00000297267 ZNF562Q6V9R5 426 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 CEP290O15078 2479 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 GNRH2O43555 120 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 DYSFO75923 2080 aa12.36□□□□□ -0.43
FNDC1-201ENST00000297267 F5H768 121 aa12.35□□□□□ -0.43
FNDC1-201ENST00000297267 K7EN84 100 aa12.35□□□□□ -0.43
FNDC1-201ENST00000297267 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
FNDC1-201ENST00000297267 A0A0J9YY99 117 aa12.35□□□□□ -0.43
FNDC1-201ENST00000297267 PRIMA1Q86XR5 153 aa12.35□□□□□ -0.43
FNDC1-201ENST00000297267 ESM1Q9NQ30 184 aa12.34□□□□□ -0.43
FNDC1-201ENST00000297267 GATA1P15976 413 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-201ENST00000297267 RASL11AQ6T310 242 aa12.34□□□□□ -0.43
FNDC1-201ENST00000297267 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
FNDC1-201ENST00000297267 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-201ENST00000297267 AZU1P20160 251 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 C8orf86Q6ZUL3 223 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
FNDC1-201ENST00000297267 WIPF2Q8TF74 440 aaPredicted RBP12.33□□□□□ -0.44
FNDC1-201ENST00000297267 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
FNDC1-201ENST00000297267 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 COL4A3Q01955 1670 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 ZNF106Q9H2Y7 1883 aaKnown RBP12.33□□□□□ -0.44
FNDC1-201ENST00000297267 VCYO14598 125 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 TMEM86BQ8N661 226 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 SNHG12Q9BXW3 62 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
FNDC1-201ENST00000297267 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 LYL1P12980 280 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 FOXE3Q13461 319 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 LEPROTO15243 131 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 PPBPP02775 128 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 PMVKQ15126 192 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 Q6ZQT7 251 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 LINC01356Q8N9X3 169 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms