RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF705FA8MVS1 300 aaPredicted RBP19.61■□□□□ 0.73
SSU72-201ENST00000291386 IGKV3-20P01619 116 aa19.61■□□□□ 0.73
SSU72-201ENST00000291386 STAG3L2P0CL84 134 aa19.61■□□□□ 0.73
SSU72-201ENST00000291386 STAG3L3P0CL85 134 aa19.61■□□□□ 0.73
SSU72-201ENST00000291386 UBE2L3P68036 154 aaKnown RBP19.61■□□□□ 0.73
SSU72-201ENST00000291386 HYLS1Q96M11 299 aa19.61■□□□□ 0.73
SSU72-201ENST00000291386 LYPD1Q8N2G4 141 aa19.6■□□□□ 0.73
SSU72-201ENST00000291386 RAB24Q969Q5 203 aa19.6■□□□□ 0.73
SSU72-201ENST00000291386 ACTR3CQ9C0K3 210 aaPredicted RBP19.6■□□□□ 0.73
SSU72-201ENST00000291386 AAMDCQ9H7C9 122 aa19.6■□□□□ 0.73
SSU72-201ENST00000291386 ZNF705DP0CH99 300 aaPredicted RBP19.59■□□□□ 0.73
SSU72-201ENST00000291386 ZNF705BP0CI00 300 aaPredicted RBP19.59■□□□□ 0.73
SSU72-201ENST00000291386 HIST1H1AQ02539 215 aaPredicted RBP19.59■□□□□ 0.73
SSU72-201ENST00000291386 LGALSLQ3ZCW2 172 aaPredicted RBP19.59■□□□□ 0.73
SSU72-201ENST00000291386 SLC35B3Q9H1N7 401 aa19.59■□□□□ 0.73
SSU72-201ENST00000291386 PRAC2D3DTV9 90 aa19.58■□□□□ 0.72
SSU72-201ENST00000291386 EIF3GO75821 320 aaKnown RBP eCLIP19.58■□□□□ 0.72
SSU72-201ENST00000291386 EIF5AP63241 154 aaKnown RBP19.58■□□□□ 0.72
SSU72-201ENST00000291386 EXOC3-AS1Q8N2X6 119 aa19.58■□□□□ 0.72
SSU72-201ENST00000291386 PHYHIPLQ96FC7 376 aa19.58■□□□□ 0.72
SSU72-201ENST00000291386 RARRES2Q99969 163 aa19.58■□□□□ 0.72
SSU72-201ENST00000291386 ZNF471Q9BX82 626 aaPredicted RBP19.58■□□□□ 0.72
SSU72-201ENST00000291386 XCL2Q9UBD3 114 aa19.58■□□□□ 0.72
SSU72-201ENST00000291386 PFDN1O60925 122 aa19.57■□□□□ 0.72
SSU72-201ENST00000291386 SEC11BP0C7V7 166 aa19.57■□□□□ 0.72
SSU72-201ENST00000291386 AKR1C8PQ5T2L2 129 aa19.57■□□□□ 0.72
SSU72-201ENST00000291386 ZNF705EA8MWA4 302 aaPredicted RBP19.56■□□□□ 0.72
SSU72-201ENST00000291386 M0R3E3 92 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 AMBPP02760 352 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 ICAM4Q14773 271 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 OR10J6PQ8NGY7 276 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 OR11H2Q8NH07 326 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 SUN5Q8TC36 379 aa19.56■□□□□ 0.72
SSU72-201ENST00000291386 HMGB3O15347 200 aaKnown RBP19.55■□□□□ 0.72
SSU72-201ENST00000291386 ARL14EPLP0DKL9 152 aa19.55■□□□□ 0.72
SSU72-201ENST00000291386 STOML3Q8TAV4 291 aa19.55■□□□□ 0.72
SSU72-201ENST00000291386 CTXND1A0A1B0GTU2 59 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 NPIPB6E9PJ23 425 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 FXYD7P58549 80 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 RANP62826 216 aaKnown RBP19.54■□□□□ 0.72
SSU72-201ENST00000291386 CD300CQ08708 224 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 ZNF726P1Q15940 193 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 SSX7Q7RTT5 188 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 BAP18Q8IXM2 172 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 Q9H3A6 140 aa19.54■□□□□ 0.72
SSU72-201ENST00000291386 CXorf1O96002 111 aa19.53■□□□□ 0.72
SSU72-201ENST00000291386 TPT1P13693 172 aaKnown RBP19.53■□□□□ 0.72
SSU72-201ENST00000291386 ZNF705AQ6ZN79 300 aaPredicted RBP19.53■□□□□ 0.72
SSU72-201ENST00000291386 BOLA2-SMG1P6H3BVE0 249 aa19.52■□□□□ 0.72
SSU72-201ENST00000291386 GCHFRP30047 84 aa19.52■□□□□ 0.72
SSU72-201ENST00000291386 X6R8D5 127 aa19.52■□□□□ 0.72
SSU72-201ENST00000291386 CRXO43186 299 aaPredicted RBP19.51■□□□□ 0.71
SSU72-201ENST00000291386 PRB4P10163 310 aaPredicted RBP19.51■□□□□ 0.71
SSU72-201ENST00000291386 IGF2BP2-AS1Q96M15 143 aa19.51■□□□□ 0.71
SSU72-201ENST00000291386 ODF3Q96PU9 254 aa19.51■□□□□ 0.71
SSU72-201ENST00000291386 NEU1Q99519 415 aa19.51■□□□□ 0.71
SSU72-201ENST00000291386 OTORQ9NRC9 128 aa19.51■□□□□ 0.71
SSU72-201ENST00000291386 PLA2G2EQ9NZK7 142 aa19.51■□□□□ 0.71
SSU72-201ENST00000291386 DNAH7Q8WXX0 4024 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 UMAD1C9J7I0 102 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 MIFP14174 115 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 SPINK13Q1W4C9 94 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 ARL6IP6Q8N6S5 226 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 C11orf68Q9H3H3 251 aaKnown RBP19.5■□□□□ 0.71
SSU72-201ENST00000291386 TMEM167BQ9NRX6 74 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 PPP1R14DQ9NXH3 145 aa19.5■□□□□ 0.71
SSU72-201ENST00000291386 M0R2Z0 102 aa19.49■□□□□ 0.71
SSU72-201ENST00000291386 ZFP69Q49AA0 526 aa19.49■□□□□ 0.71
SSU72-201ENST00000291386 RXFP4Q8TDU9 374 aa19.49■□□□□ 0.71
SSU72-201ENST00000291386 LINC00477Q96M19 166 aa19.49■□□□□ 0.71
SSU72-201ENST00000291386 A0A0J9YWU9 116 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 CDKN1BP46527 198 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 CSN1S1P47710 185 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 FAM74A1Q5RGS3 127 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 C9orf47Q6ZRZ4 202 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 C1orf158Q8N1D5 194 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 C9orf62Q8N4C0 152 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 Q8NAQ8 132 aa19.48■□□□□ 0.71
SSU72-201ENST00000291386 RBAKDNA6NC62 111 aa19.47■□□□□ 0.71
SSU72-201ENST00000291386 PGPA6NDG6 321 aa19.47■□□□□ 0.71
SSU72-201ENST00000291386 CT45A10P0DMU9 189 aa19.47■□□□□ 0.71
SSU72-201ENST00000291386 TSPOP30536 169 aa19.47■□□□□ 0.71
SSU72-201ENST00000291386 GOLT1BQ9Y3E0 138 aa19.47■□□□□ 0.71
SSU72-201ENST00000291386 SMIM9A6NGZ8 99 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 INSP01308 110 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 SLC25A5P05141 298 aaKnown RBP19.46■□□□□ 0.71
SSU72-201ENST00000291386 DPPA3Q6W0C5 159 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 SLC51BQ86UW2 128 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 MUC7Q8TAX7 377 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 AGPAT4-IT1Q9H0P7 198 aa19.46■□□□□ 0.71
SSU72-201ENST00000291386 ERCC8Q13216 396 aa19.45■□□□□ 0.7
SSU72-201ENST00000291386 FAM19A4Q96LR4 140 aa19.45■□□□□ 0.7
SSU72-201ENST00000291386 MAP1LC3B2A6NCE7 125 aa19.44■□□□□ 0.7
SSU72-201ENST00000291386 DIRC3C9JPN6 131 aa19.44■□□□□ 0.7
SSU72-201ENST00000291386 LEPP41159 167 aa19.44■□□□□ 0.7
SSU72-201ENST00000291386 EIF5AL1Q6IS14 154 aaKnown RBP19.44■□□□□ 0.7
SSU72-201ENST00000291386 TMED6Q8WW62 240 aa19.44■□□□□ 0.7
SSU72-201ENST00000291386 MAP1LC3BQ9GZQ8 125 aa19.44■□□□□ 0.7
SSU72-201ENST00000291386 TRAV12-2A0A075B6T6 113 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 IGKV2-40A0A087WW87 121 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms