RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SLC25A20O43772 301 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 SRSF8Q9BRL6 282 aaKnown RBP12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 CCL25O15444 150 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 FAM104BQ5XKR9 115 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 CEACAM8P31997 349 aaPredicted RBP12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 ATP6V0BQ99437 205 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 H3BUX3 64 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 MMP23AO75900 390 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 SLC25A16P16260 332 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
SHROOM4-201ENST00000289292 IL15RAQ13261 267 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 H3BMG7 143 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 C9orf153Q5TBE3 101 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 GAGE12HA6NDE8 117 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 NUPR1O60356 82 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 KLF2Q9Y5W3 355 aaPredicted RBP12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 PAX4O43316 350 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 UBE2E2Q96LR5 201 aa12.3□□□□□ -0.44
SHROOM4-201ENST00000289292 TRAV13-1A0A0B4J241 112 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 TIMM21Q9BVV7 248 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 CRPP02741 224 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 E7EQL1 145 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 NDUFB8O95169 186 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 DOCK9Q9BZ29 2069 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 KNCNA6PVL3 124 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 LMO1P25800 156 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 H3BMM0 161 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 UBE2WQ96B02 151 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
SHROOM4-201ENST00000289292 AHCTF1Q8WYP5 2266 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 MBD3L4A6NDZ8 208 aaPredicted RBP12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 MBD3L3A6NE82 208 aaPredicted RBP12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 MBD3L5A6NJ08 208 aaPredicted RBP12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 MBD3L2Q8NHZ7 208 aaPredicted RBP12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 C1orf159Q96HA4 380 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 KIAA1671Q9BY89 1806 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 C15orf65H3BRN8 121 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 IGFBPL1Q8WX77 278 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 CEND1Q8N111 149 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 RNF5Q99942 180 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 NPYP01303 97 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 WT1-ASQ06250 92 aa12.28□□□□□ -0.44
SHROOM4-201ENST00000289292 FXYD5Q96DB9 178 aa12.27□□□□□ -0.44
SHROOM4-201ENST00000289292 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.44
SHROOM4-201ENST00000289292 F8W1H4 67 aa12.27□□□□□ -0.44
SHROOM4-201ENST00000289292 DKK2Q9UBU2 259 aa12.27□□□□□ -0.44
SHROOM4-201ENST00000289292 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.44
SHROOM4-201ENST00000289292 PLXNB3Q9ULL4 1909 aa12.27□□□□□ -0.45
SHROOM4-201ENST00000289292 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
SHROOM4-201ENST00000289292 ATP6V0E1O15342 81 aa12.27□□□□□ -0.45
SHROOM4-201ENST00000289292 SAA4P35542 130 aa12.27□□□□□ -0.45
SHROOM4-201ENST00000289292 MINOS1Q5TGZ0 78 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 MINOS1-NBL1R4GNA1 71 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 IGHV3-16A0A0C4DH30 117 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 ETV2O00321 342 aaPredicted RBP12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 TEX36Q5VZQ5 186 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 Q8N8P6 123 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 IGLV3-1P01715 115 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 CDKN1BP46527 198 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 EFNA4P52798 201 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 OVOL3O00110 214 aa12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 PRR30Q53SZ7 412 aaPredicted RBP12.26□□□□□ -0.45
SHROOM4-201ENST00000289292 LY6G6EA0A0G2JKS1 128 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 G3V318 75 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 MSRB2Q9Y3D2 182 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 U3KQA8 63 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 M0R1W7 72 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 IGHG3P01860 377 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 SS18L2Q9UHA2 77 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 MORN5Q5VZ52 161 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 HEATR1Q9H583 2144 aaKnown RBP12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 FRMPD3Q5JV73 1810 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 C2orf66Q6UXQ4 117 aa12.25□□□□□ -0.45
SHROOM4-201ENST00000289292 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 VGLL1Q99990 258 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms