RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TMEM241Q24JQ0 296 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 ZNF695Q8IW36 515 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TCTEX1D1Q8N7M0 179 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 OR5H2Q8NGV7 314 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TERB2Q8NHR7 220 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 TOMM6Q96B49 74 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 BORCS8Q96FH0 119 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 PSMG3Q9BT73 122 aaPredicted RBP3.25□□□□□ -1.89
CD44-202ENST00000278385 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 SND1-IT1Q9HBX3 110 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 INTS1Q8N201 2190 aaKnown RBP3.25□□□□□ -1.89
CD44-202ENST00000278385 KIAA1549Q9HCM3 1950 aa3.25□□□□□ -1.89
CD44-202ENST00000278385 MAST4O15021 2626 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 IGKV1D-42A0A075B6H8 117 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 IZUMO1RA6ND01 250 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 ARRDC5A6NEK1 342 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 BBIP1A8MTZ0 92 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 J3QR89 54 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 M0R143 59 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SERF1AO75920 110 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 IGKV3-15P01624 115 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 MRGPRG-AS1Q2M3A8 158 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 C10orf111Q8N326 155 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SLC25A29Q8N8R3 303 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 OR4K5Q8NGD3 323 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 RAB2BQ8WUD1 216 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SFT2D1Q8WV19 159 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 CMBLQ96DG6 245 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SMR3AQ99954 134 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 C1QTNF6Q9BXI9 259 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 REG4Q9BYZ8 158 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 HEXA-AS1Q9H8Q6 139 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SCRT2Q9NQ03 307 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 SAR1AQ9NR31 198 aa3.24□□□□□ -1.89
CD44-202ENST00000278385 MRPS16Q9Y3D3 137 aaKnown RBP3.24□□□□□ -1.89
CD44-202ENST00000278385 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
CD44-202ENST00000278385 TRAV41A0A0B4J266 112 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 IGHV1-18A0A0C4DH31 117 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 CPSF4LA6NMK7 179 aaKnown RBP3.23□□□□□ -1.89
CD44-202ENST00000278385 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 IGLL5B9A064 214 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 RBFOX2O43251 390 aaKnown RBP eCLIP3.23□□□□□ -1.89
CD44-202ENST00000278385 GAS8-AS1O95177 125 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 IGLV1-44P01699 117 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 TRGC2P03986 189 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 GPX1P07203 203 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 SLC25A16P16260 332 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 EFNA4P52798 201 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 MPV17L2Q567V2 206 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 LDLRAD2Q5SZI1 272 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 GLIPR1L1Q6UWM5 242 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 ARPINQ7Z6K5 226 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 ZDHHC22Q8N966 263 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 ZNF709Q8N972 641 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 OR51A4Q8NGJ6 313 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 RPS4Y2Q8TD47 263 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 MED12Q93074 2177 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 WFDC6Q9BQY6 131 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 CHAC1Q9BUX1 264 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 EFCAB1Q9HAE3 211 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 OTORQ9NRC9 128 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 SCN3BQ9NY72 215 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 CACNG5Q9UF02 275 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 NAT8Q9UHE5 227 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 ARHGAP21Q5T5U3 1957 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 EXPH5Q8NEV8 1989 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 FBN2P35556 2912 aa3.23□□□□□ -1.89
CD44-202ENST00000278385 FREM3P0C091 2139 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 CSMD2Q7Z408 3487 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 IGLV7-46A0A075B6I9 117 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 IGHV3-72A0A0B4J1Y9 119 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 CCL25O15444 150 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 UBL3O95164 117 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 AMBPP02760 352 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 ASAH2BP0C7U1 165 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 SEC11BP0C7V7 166 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 INAFM2P0DMQ5 153 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 LINC00694P0DN24 101 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 ZNF823P16415 610 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 RBMXP38159 391 aaKnown RBP3.22□□□□□ -1.89
CD44-202ENST00000278385 EIF2B2P49770 351 aaKnown RBP3.22□□□□□ -1.89
CD44-202ENST00000278385 INSL3P51460 131 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 CRIP2P52943 208 aaPredicted RBP3.22□□□□□ -1.89
CD44-202ENST00000278385 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 LAIR2Q6ISS4 152 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 SLC25A34Q6PIV7 304 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 TMEM14EPQ6UXP3 125 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 LCA10Q71F78 164 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
CD44-202ENST00000278385 GPHB5Q86YW7 130 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms