RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TRBV7-1A0A0A6YYK4 115 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 K7EMI3 77 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 K7EP13 123 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 SLAQ13239 276 aa13.57□□□□□ -0.24
TSPAN3-201ENST00000267970 MYO7BQ6PIF6 2116 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 BPESC1Q9GZL8 116 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 C9orf118A6NHY6 69 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 G3V318 75 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 SAA4P35542 130 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 CRYBA4P53673 196 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 Q6ZWC4 215 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 C18orf32Q8TCD1 76 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 INTS1Q8N201 2190 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 A0A1B0GW64 132 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 VWC2Q2TAL6 325 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 LY6G5BQ8NDX9 201 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 BRCA1P38398 1863 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 QRFPP83859 136 aa13.56□□□□□ -0.24
TSPAN3-201ENST00000267970 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 GAGE12HA6NDE8 117 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 F5H768 121 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 IGHG3P01860 377 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 FAM166AQ6J272 317 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 IGHV4-4A0A075B6R2 117 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 EFNA4P52798 201 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 PAX9P55771 341 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 NCOR1O75376 2440 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 IGHV1-24A0A0C4DH33 117 aa13.55□□□□□ -0.24
TSPAN3-201ENST00000267970 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 DEFB105AQ8NG35 78 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 GAGE7O76087 117 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 GAGE12FP0CL80 117 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 GAGE12GP0CL81 117 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 GAGE12IP0CL82 117 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 MRPL27Q9P0M9 148 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 COL24A1Q17RW2 1714 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 TEX36Q5VZQ5 186 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 CDPF1Q6NVV7 123 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 SBF2Q86WG5 1849 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 IGLV3-32A0A0A0MS00 114 aa13.54□□□□□ -0.24
TSPAN3-201ENST00000267970 ATP6V0E1O15342 81 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 CRLF1O75462 422 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 MRPL51Q4U2R6 128 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 THADAQ6YHU6 1953 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 PRR30Q53SZ7 412 aaPredicted RBP13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 OVOL2Q9BRP0 275 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 UBL5Q9BZL1 73 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 SCRT2Q9NQ03 307 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 ANK1P16157 1881 aa13.53□□□□□ -0.24
TSPAN3-201ENST00000267970 WISP1O95388 367 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 HLA-DRB4P13762 266 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 C2orf66Q6UXQ4 117 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 HLA-DRB4X5D2U9 266 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 SVIPQ8NHG7 77 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 PPDPFLQ8WWR9 84 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 CARD19Q96LW7 228 aa13.52□□□□□ -0.24
TSPAN3-201ENST00000267970 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.25
TSPAN3-201ENST00000267970 NDUFB8O95169 186 aa13.52□□□□□ -0.25
TSPAN3-201ENST00000267970 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
TSPAN3-201ENST00000267970 ZNF726P1Q15940 193 aa13.52□□□□□ -0.25
TSPAN3-201ENST00000267970 ARTNQ5T4W7 220 aa13.52□□□□□ -0.25
TSPAN3-201ENST00000267970 ZNRF2Q8NHG8 242 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 LOC285556D6RIA3 1793 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 MMP23AO75900 390 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 IGLL1P15814 213 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 ZNF561-AS1K7EIQ3 104 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 IGHG4P01861 327 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 CD59P13987 128 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 DOCK7Q96N67 2140 aa13.51□□□□□ -0.25
TSPAN3-201ENST00000267970 RNF223E7ERA6 249 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 MBD3L4A6NDZ8 208 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 MBD3L3A6NE82 208 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 MBD3L5A6NJ08 208 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 TMEM75Q8N9X5 138 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 MBD3L2Q8NHZ7 208 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 SHANK2-AS3Q9BTD1 123 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 SMIM20Q8N5G0 67 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 LCTP09848 1927 aa13.5□□□□□ -0.25
TSPAN3-201ENST00000267970 K7EP34 96 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 DAD1P61803 113 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 IGKV1-39P01597 117 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 IGKV1D-39P04432 117 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 CGB3P0DN86 165 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 GATA4P43694 442 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 DSCR8Q96T75 97 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 IGHV4-28A0A0C4DH34 117 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 DIAPH2-AS1Q14236 149 aa13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-201ENST00000267970 A0A1W2PPM0 123 aa13.48□□□□□ -0.25
TSPAN3-201ENST00000267970 HLA-DMBP28068 263 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms