RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NEGR1Q7Z3B1 354 aa14.49□□□□□ -0.09
COL5A3-201ENST00000264828 IGHV3-38A0A0C4DH36 116 aa14.49□□□□□ -0.09
COL5A3-201ENST00000264828 IGKV1-6A0A0C4DH72 117 aa14.49□□□□□ -0.09
COL5A3-201ENST00000264828 UNQ6494/PRO21346Q6UXR6 183 aa14.49□□□□□ -0.09
COL5A3-201ENST00000264828 TSSC4Q9Y5U2 329 aaPredicted RBP14.49□□□□□ -0.09
COL5A3-201ENST00000264828 ATP6V0E1O15342 81 aa14.48□□□□□ -0.09
COL5A3-201ENST00000264828 SNHG12Q9BXW3 62 aa14.48□□□□□ -0.09
COL5A3-201ENST00000264828 C2orf66Q6UXQ4 117 aa14.48□□□□□ -0.09
COL5A3-201ENST00000264828 PRSS46E5RG02 174 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 SOCS3O14543 225 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 VWA8A3KMH1 1905 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 Q6ZS49 121 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 C1QTNF4Q9BXJ3 329 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 APC2O95996 2303 aa14.47□□□□□ -0.09
COL5A3-201ENST00000264828 IGHV1-24A0A0C4DH33 117 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 FNDC10F2Z333 226 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 FAM104BQ5XKR9 115 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 Q8N8P6 123 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 ZNF492Q9P255 531 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 C9orf118A6NHY6 69 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 NDUFB8O95169 186 aa14.46□□□□□ -0.09
COL5A3-201ENST00000264828 PFN1P07737 140 aaKnown RBP14.46□□□□□ -0.09
COL5A3-201ENST00000264828 MRPL51Q4U2R6 128 aaKnown RBP14.46□□□□□ -0.09
COL5A3-201ENST00000264828 RBMY1FQ15415 496 aaKnown RBP14.46□□□□□ -0.1
COL5A3-201ENST00000264828 Q6ZWC4 215 aa14.46□□□□□ -0.1
COL5A3-201ENST00000264828 TICRRQ7Z2Z1 1910 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 SLAQ13239 276 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 TSC2P49815 1807 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 TRAV12-2A0A075B6T6 113 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 E7EQL1 145 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 NPSP0C0P6 89 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 HAPLN4Q86UW8 402 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 I3L3M4 83 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 PDE6HQ13956 83 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 MRAPQ8TCY5 172 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 ZNF726P1Q15940 193 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 MAPK1IP1LQ8NDC0 245 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 TMEM141Q96I45 108 aa14.45□□□□□ -0.1
COL5A3-201ENST00000264828 THADAQ6YHU6 1953 aa14.44□□□□□ -0.1
COL5A3-201ENST00000264828 NXPH4O95158 308 aa14.44□□□□□ -0.1
COL5A3-201ENST00000264828 RNF166Q96A37 237 aaPredicted RBP14.44□□□□□ -0.1
COL5A3-201ENST00000264828 C20orf144Q9BQM9 153 aa14.44□□□□□ -0.1
COL5A3-201ENST00000264828 MBD3L4A6NDZ8 208 aaPredicted RBP14.44□□□□□ -0.1
COL5A3-201ENST00000264828 MBD3L3A6NE82 208 aaPredicted RBP14.44□□□□□ -0.1
COL5A3-201ENST00000264828 MBD3L5A6NJ08 208 aaPredicted RBP14.44□□□□□ -0.1
COL5A3-201ENST00000264828 MBD3L2Q8NHZ7 208 aaPredicted RBP14.44□□□□□ -0.1
COL5A3-201ENST00000264828 TRAV25A0A0B4J276 109 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 K7ERJ3 54 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 DUX4L9Q6RFH8 374 aaPredicted RBP14.43□□□□□ -0.1
COL5A3-201ENST00000264828 ZNF561-AS1K7EIQ3 104 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 TMEM14BQ9NUH8 114 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 G3V318 75 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 LINC01356Q8N9X3 169 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 WIPF3A6NGB9 483 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 FGF6P10767 208 aa14.43□□□□□ -0.1
COL5A3-201ENST00000264828 F5H768 121 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 AZU1P20160 251 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 GAGE6Q13070 117 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 TRBV19A0A075B6N1 114 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 TRBV25-1A0A075B6N4 114 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 NDUFA4L2Q9NRX3 87 aa14.42□□□□□ -0.1
COL5A3-201ENST00000264828 TRAV12-1A0A0B4J245 112 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 PAX9P55771 341 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 FHL1Q13642 323 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 FOXL2NBQ6ZUU3 175 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 TMEM126AQ9H061 195 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 DOCK6Q96HP0 2047 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 HAMPP81172 84 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 V9GYV3 84 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 ANXA2RQ3ZCQ2 193 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 FAM110DQ8TAY7 271 aaPredicted RBP14.41□□□□□ -0.1
COL5A3-201ENST00000264828 SRSF8Q9BRL6 282 aaKnown RBP14.41□□□□□ -0.1
COL5A3-201ENST00000264828 TEX36Q5VZQ5 186 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 LRRK1Q38SD2 2015 aa14.41□□□□□ -0.1
COL5A3-201ENST00000264828 RNASE13Q5GAN3 156 aaKnown RBP14.4□□□□□ -0.1
COL5A3-201ENST00000264828 C8orf86Q6ZUL3 223 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 IGLC2P0DOY2 106 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 IGLC3P0DOY3 106 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 GAGE7O76087 117 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 GAGE12FP0CL80 117 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 GAGE12GP0CL81 117 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 GAGE12IP0CL82 117 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 ETDBQ3ZM63 59 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 ZNRF2Q8NHG8 242 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 RNF223E7ERA6 249 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 IGLL1P15814 213 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 CITED1Q99966 193 aa14.4□□□□□ -0.1
COL5A3-201ENST00000264828 SMIM27A0A1W2PRY6 76 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 SDHAF1A6NFY7 115 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 FAM186AA6NE01 2351 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 NKAPP1Q8N9T2 125 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 FRMPD3Q5JV73 1810 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 K7EP34 96 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 PPDPFLQ8WWR9 84 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 SIGLEC8Q9NYZ4 499 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 CEND1Q8N111 149 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 LINC01619G3V211 115 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 TPSG1Q9NRR2 321 aa14.39□□□□□ -0.11
COL5A3-201ENST00000264828 A0A096LPF7 62 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms