RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
TUBGCP3-201ENST00000261965 PSG3Q16557 428 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 BEX4Q9NWD9 120 aaPredicted RBP11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 ANKRD39Q53RE8 183 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 TIMM23O14925 209 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 LOXL1Q08397 574 aaPredicted RBP11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
TUBGCP3-201ENST00000261965 IGLV3-9A0A075B6K5 115 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 RNF125Q96EQ8 232 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 PTPRBP23467 1997 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 PET117Q6UWS5 81 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 C1RLQ9NZP8 487 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 PRR30Q53SZ7 412 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
TUBGCP3-201ENST00000261965 C22orf46C9J442 243 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 CRYABP02511 175 aaKnown RBP11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 ERCC8Q13216 396 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 ZC2HC1BQ5TFG8 222 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 VKORC1Q9BQB6 163 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 A0A0G2JNJ9 132 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 MSRB1Q9NZV6 116 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 Q9UFV3 132 aa11.16□□□□□ -0.62
TUBGCP3-201ENST00000261965 IGHV2-70DA0A0C4DH43 119 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 VWC2LB2RUY7 222 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 TAX1BP3O14907 124 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 FAM74A4Q5TZK3 123 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 SAMD13Q5VXD3 122 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 Q86TA4 180 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 C8orf46Q8TAG6 207 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 TIMD4Q96H15 378 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 HBDP02042 147 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 CD3EP07766 207 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 LGALS7P47929 136 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 PSMB2P49721 201 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 CR1LQ2VPA4 569 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 ETDBQ3ZM63 59 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 C2orf70A6NJV1 201 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 TM4SF5O14894 197 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 CIDEAO60543 219 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 RHOGP84095 191 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 CENPEQ02224 2701 aa11.15□□□□□ -0.62
TUBGCP3-201ENST00000261965 ASH1LQ9NR48 2969 aaKnown RBP11.15□□□□□ -0.63
TUBGCP3-201ENST00000261965 SVEP1Q4LDE5 3571 aa11.15□□□□□ -0.63
TUBGCP3-201ENST00000261965 SRD5A1P18405 259 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 RBX1P62877 108 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 POLQO75417 2590 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 FCN3O75636 299 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 NDPQ00604 133 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 FOXC1Q12948 553 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 Q8N976 141 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 ZZEF1O43149 2961 aa11.14□□□□□ -0.63
TUBGCP3-201ENST00000261965 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 TMEM167AQ8TBQ9 72 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 RAI1Q7Z5J4 1906 aaPredicted RBP11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 CD5LO43866 347 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 CTRLP40313 264 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 ZNF292O60281 2723 aa11.13□□□□□ -0.63
TUBGCP3-201ENST00000261965 GATA4P43694 442 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 MFAP4P55083 255 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 SH2D1AO60880 128 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 TOMM40O96008 361 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 SIGLEC9Q9Y336 463 aa11.12□□□□□ -0.63
TUBGCP3-201ENST00000261965 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
TUBGCP3-201ENST00000261965 NPYP01303 97 aa11.11□□□□□ -0.63
TUBGCP3-201ENST00000261965 IGHV1-8P0DP01 117 aa11.11□□□□□ -0.63
TUBGCP3-201ENST00000261965 LOXP28300 417 aaPredicted RBP11.11□□□□□ -0.63
TUBGCP3-201ENST00000261965 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms