RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KLK15Q9H2R5 256 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
SLIRP-201ENST00000238688 A8MWP6 167 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 LTAP01374 205 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 ELOBQ15370 118 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-201ENST00000238688 OR10G8Q8NGN5 311 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 PYGO2Q9BRQ0 406 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-201ENST00000238688 ZNF492Q9P255 531 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 TGP01266 2768 aa10.1□□□□□ -0.79
SLIRP-201ENST00000238688 NOTCH3Q9UM47 2321 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 PPP5D1E7EU14 171 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 RAB5AP20339 215 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 COX19Q49B96 90 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 CT83Q5H943 113 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 GLMPQ8WWB7 406 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
SLIRP-201ENST00000238688 IGHV7-4-1A0A0J9YVY3 117 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 TYMSP04818 313 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 PFN1P07737 140 aaKnown RBP10.08□□□□□ -0.8
SLIRP-201ENST00000238688 RPEL1Q2QD12 228 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 COX8CQ7Z4L0 72 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 C4orf3Q8WVX3 66 aa10.08□□□□□ -0.8
SLIRP-201ENST00000238688 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 ERVFC1-1P60608 527 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 DEFA6Q01524 100 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 PSG3Q16557 428 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 Q86TA4 180 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 OR4B1Q8NGF8 309 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 PPP1R14DQ9NXH3 145 aa10.07□□□□□ -0.8
SLIRP-201ENST00000238688 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 K7EN84 100 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 IGHV3-11P01762 117 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 RAB5BP61020 215 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 FLI1Q01543 452 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 IBA57Q5T440 356 aaKnown RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 WIPF2Q8TF74 440 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 SAV1Q9H4B6 383 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-201ENST00000238688 IL36BQ9NZH7 164 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 SMPXQ9UHP9 88 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
SLIRP-201ENST00000238688 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 M0QZ24 198 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 SLC17A3O00476 420 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 EXOC3-AS1Q8N2X6 119 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 MLXQ9UH92 298 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 SMAD5-AS1Q9Y6J3 95 aa10.05□□□□□ -0.8
SLIRP-201ENST00000238688 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 IGLV2-11P01706 119 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 GNG5P63218 68 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 SRD5A3Q9H8P0 318 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 NRN1Q9NPD7 142 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 V9GYV3 84 aa10.04□□□□□ -0.8
SLIRP-201ENST00000238688 ZNF320A2RRD8 509 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 CHEK1O14757 476 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 MGST1P10620 155 aaKnown RBP10.03□□□□□ -0.8
SLIRP-201ENST00000238688 C8orf86Q6ZUL3 223 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 DAZAP1Q96EP5 407 aaKnown RBP10.03□□□□□ -0.8
SLIRP-201ENST00000238688 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 PSG8Q9UQ74 426 aa10.03□□□□□ -0.8
SLIRP-201ENST00000238688 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 PGPEP1LA6NFU8 196 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 A8MWL6 223 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 LINC01619G3V211 115 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 GATCO43716 136 aaKnown RBP10.02□□□□□ -0.81
SLIRP-201ENST00000238688 ID1P41134 155 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 KLF5Q13887 457 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-201ENST00000238688 Q6AWC8 147 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 LCN12Q6JVE5 192 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.81
SLIRP-201ENST00000238688 URGCP-MRPS24S4R325 110 aa10.02□□□□□ -0.81
SLIRP-201ENST00000238688 TRAV34A0A0B4J273 112 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
SLIRP-201ENST00000238688 XKRY2A2RUG3 117 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms