RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ACTL10Q5JWF8 245 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 GDF5OSQ5U4N7 250 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 ZNF738Q8NE65 137 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 RPUSD4Q96CM3 377 aaKnown RBP7.52□□□□□ -1.21
HMGCL-201ENST00000235958 Q9H3A6 140 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 SRD5A3Q9H8P0 318 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 PRELID1Q9Y255 219 aa7.52□□□□□ -1.21
HMGCL-201ENST00000235958 A0A1W2PRE2 83 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 A8MZ25 164 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 PRAC2D3DTV9 90 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 H3BMM0 161 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 TEX46H3BTG2 121 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 HBE1P02100 147 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 ZNF705DP0CH99 300 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-201ENST00000235958 ZNF705BP0CI00 300 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-201ENST00000235958 UBE2G2P60604 165 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 EBLN2Q6P2I7 272 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 SAV1Q9H4B6 383 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-201ENST00000235958 OTORQ9NRC9 128 aa7.51□□□□□ -1.21
HMGCL-201ENST00000235958 A0A0J9YX75 114 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 FAM74A7A6NL05 159 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
HMGCL-201ENST00000235958 LINC00322Q6ZN03 302 aaPredicted RBP7.5□□□□□ -1.21
HMGCL-201ENST00000235958 FOXI2Q6ZQN5 318 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 STHQ8IWL8 128 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 MRAPQ8TCY5 172 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 RXFP4Q8TDU9 374 aa7.5□□□□□ -1.21
HMGCL-201ENST00000235958 MRPL53Q96EL3 112 aaKnown RBP7.5□□□□□ -1.21
HMGCL-201ENST00000235958 YTHDF2Q9Y5A9 579 aaKnown RBP7.5□□□□□ -1.21
HMGCL-201ENST00000235958 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 PAGE4O60829 102 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 IGKV3-20P01619 116 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 SLC25A5P05141 298 aaKnown RBP7.49□□□□□ -1.21
HMGCL-201ENST00000235958 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 CSN1S1P47710 185 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 IFITM2Q01629 132 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 PMS2P11Q13670 270 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 CST9LP1Q5W188 147 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 OR4B1Q8NGF8 309 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 LYPD6BQ8NI32 183 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 CMTM2Q8TAZ6 248 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 NKX6-2Q9C056 277 aaPredicted RBP7.49□□□□□ -1.21
HMGCL-201ENST00000235958 GNG13Q9P2W3 67 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 EPDR1Q9UM22 224 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
HMGCL-201ENST00000235958 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 LOC102724200A0A096LPH7 203 aaPredicted RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 GGTLC3B5MD39 225 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 DIRC3C9JPN6 131 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 DUSP14O95147 198 aaKnown RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 PPT1P50897 306 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 CNN1P51911 297 aaKnown RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 HIST1H1AQ02539 215 aaPredicted RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 TRPT1Q86TN4 253 aaKnown RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 CCDC28AQ8IWP9 274 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 ARL6IP6Q8N6S5 226 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 OR10J6PQ8NGY7 276 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 PCNPQ8WW12 178 aaKnown RBP7.48□□□□□ -1.21
HMGCL-201ENST00000235958 CLUHP3Q96NS8 147 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 VGLL1Q99990 258 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 AGPAT4-IT1Q9H0P7 198 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 CSTL1Q9H114 145 aa7.48□□□□□ -1.21
HMGCL-201ENST00000235958 IGKV2-40A0A087WW87 121 aaPredicted RBP7.47□□□□□ -1.21
HMGCL-201ENST00000235958 IGKV2D-40P01614 121 aaPredicted RBP7.47□□□□□ -1.21
HMGCL-201ENST00000235958 GNG5P63218 68 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 ERCC8Q13216 396 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 HAGHQ16775 308 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 C9orf47Q6ZRZ4 202 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 C5orf17Q8NAS9 161 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 LINC00477Q96M19 166 aa7.47□□□□□ -1.21
HMGCL-201ENST00000235958 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.21
HMGCL-201ENST00000235958 KIR2DL5BA0A0G2JN68 375 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 KIR2DL5BA0A0G2JPC4 375 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 A8MTW9 85 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 NPIPB6E9PJ23 425 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 TCRAP04437 139 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 NMBP08949 121 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
HMGCL-201ENST00000235958 CT45A10P0DMU9 189 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 ATP5G3P48201 142 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 FXYD7P58549 80 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 AMTNQ6UX39 209 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 GOLT1AQ6ZVE7 132 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 KIR2DL5AQ8N109 375 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 KIR2DL5BQ8NHK3 375 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 RARRES2Q99969 163 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 RPH3ALQ9UNE2 315 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 ARL2-SNX15V9GYD0 113 aa7.46□□□□□ -1.22
HMGCL-201ENST00000235958 RBAKDNA6NC62 111 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 RBFOX3A6NFN3 312 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 C11orf94C9JXX5 98 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 IFNA1P01562 189 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 APOC4P55056 127 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 RAB14P61106 215 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 NUTF2P61970 127 aaKnown RBP7.45□□□□□ -1.22
HMGCL-201ENST00000235958 TMEM78Q5T7P6 136 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms