RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NAV3Q8IVL0 2385 aa16.2■□□□□ 0.18
SNX3-201ENST00000230085 M0QZ24 198 aa16.2■□□□□ 0.18
SNX3-201ENST00000230085 CCL3L1P16619 93 aa16.2■□□□□ 0.18
SNX3-201ENST00000230085 RPL27AP46776 148 aaKnown RBP16.2■□□□□ 0.18
SNX3-201ENST00000230085 F11RQ9Y624 299 aaKnown RBP16.2■□□□□ 0.18
SNX3-201ENST00000230085 U3KQK5 164 aa16.2■□□□□ 0.18
SNX3-201ENST00000230085 ZNF785A8K8V0 405 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 SLC25A17O43808 307 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 DSCR9P59020 149 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 OR10AG1Q8NH19 301 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 TMUB1Q9BVT8 246 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 CREBBPQ92793 2442 aa16.19■□□□□ 0.18
SNX3-201ENST00000230085 SIVA1O15304 175 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 IGLC1P0CG04 106 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 HTR1DP28221 377 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 CEACAM3P40198 252 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 TMEM155Q4W5P6 130 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 PSMG4Q5JS54 123 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 SMIM15Q7Z3B0 74 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 PIMREGQ9BSJ6 248 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 ITPR3Q14573 2671 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 OR2T8A6NH00 312 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 NDUFS8O00217 210 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 PSG9Q00887 426 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 COX8CQ7Z4L0 72 aa16.18■□□□□ 0.18
SNX3-201ENST00000230085 PPIAL4EA0A075B759 164 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 PPIAL4DF5H284 164 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 PPIAL4FP0DN26 164 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 FGF6P10767 208 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 LGALS9BQ3B8N2 356 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 RUSC1-AS1Q66K80 236 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 LGALS9CQ6DKI2 356 aa16.17■□□□□ 0.18
SNX3-201ENST00000230085 SLC25A39Q9BZJ4 359 aaPredicted RBP16.17■□□□□ 0.18
SNX3-201ENST00000230085 BPIFA4PQ86YQ2 179 aa16.16■□□□□ 0.18
SNX3-201ENST00000230085 RNF5Q99942 180 aa16.16■□□□□ 0.18
SNX3-201ENST00000230085 TPSG1Q9NRR2 321 aa16.16■□□□□ 0.18
SNX3-201ENST00000230085 MED13LQ71F56 2210 aa16.16■□□□□ 0.18
SNX3-201ENST00000230085 K7ERU9 68 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 NDUFB3O43676 98 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 ARF6P62330 175 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 DIAPH2-AS1Q14236 149 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 PIFOQ8TCI5 191 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 TIMD4Q96H15 378 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 SGK494Q96LW2 274 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 TRBV19A0A075B6N1 114 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 TEX22C9J3V5 150 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 K7EQM0 130 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 IGHV3-48P01763 117 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 PSG1P11464 419 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 AMMECR1LQ6DCA0 310 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 UFSP1Q6NVU6 142 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 CIARTQ8N365 385 aaPredicted RBP16.15■□□□□ 0.18
SNX3-201ENST00000230085 SIGLEC9Q9Y336 463 aa16.15■□□□□ 0.18
SNX3-201ENST00000230085 SERTM2A0A1B0GWG4 89 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 RNF223E7ERA6 249 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 I3L2K1 104 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 TMEM97Q5BJF2 176 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 LDLRAD2Q5SZI1 272 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 OR9G4Q8NGQ1 327 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 SHANK2-AS3Q9BTD1 123 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 RPH3ALQ9UNE2 315 aa16.14■□□□□ 0.17
SNX3-201ENST00000230085 IGHV4-61A0A0C4DH41 118 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 H3BRM9 83 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 IGHV1-8P0DP01 117 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 SLC25A16P16260 332 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 CD24P25063 80 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 FA2HQ7L5A8 372 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 BOD1L2Q8IYS8 172 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 MAPK1IP1LQ8NDC0 245 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 ZC2HC1AQ96GY0 325 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 FBLL1A6NHQ2 334 aaKnown RBP16.13■□□□□ 0.17
SNX3-201ENST00000230085 H3BRN7 92 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 ARMS2P0C7Q2 107 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 PDE6HQ13956 83 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 GOLT1AQ6ZVE7 132 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 TMEM133Q9H2Q1 129 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 TP73-AS1Q9UF72 201 aa16.13■□□□□ 0.17
SNX3-201ENST00000230085 A0A096LNJ9 63 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 A0A096LNT2 108 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 GAGE12BA1L429 117 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 PSG3Q16557 428 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 HCP5Q6MZN7 132 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 SIGLEC15Q6ZMC9 328 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 PRNTQ86SH4 94 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 RITA1Q96K30 269 aa16.12■□□□□ 0.17
SNX3-201ENST00000230085 A0A087X0K7 114 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 TRAV8-6A0A0B4J262 113 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 C7orf71A4D174 169 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 MRPS12O15235 138 aaKnown RBP16.11■□□□□ 0.17
SNX3-201ENST00000230085 IGLV1-47P01700 117 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 PAX8Q06710 450 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 SVEP1Q4LDE5 3571 aa16.11■□□□□ 0.17
SNX3-201ENST00000230085 TRAV8-1A0A0A6YYK1 113 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 A6NDN8 102 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 RBP4P02753 201 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 S100A7AQ86SG5 101 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 SRSF12Q8WXF0 261 aaKnown RBP16.1■□□□□ 0.17
SNX3-201ENST00000230085 PSG8Q9UQ74 426 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 CR1P17927 2039 aa16.1■□□□□ 0.17
SNX3-201ENST00000230085 FLNAP21333 2647 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms