RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 Q0VFX4 171 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 DEFB104AQ8WTQ1 72 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 SS18L2Q9UHA2 77 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 HIST1H4AP62805 103 aaKnown RBP11.13□□□□□ -0.63
HCFC2-201ENST00000229330 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
HCFC2-201ENST00000229330 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 RNF5Q99942 180 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 SIGLEC9Q9Y336 463 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
HCFC2-201ENST00000229330 NDUFA4L2Q9NRX3 87 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 DKK2Q9UBU2 259 aa11.13□□□□□ -0.63
HCFC2-201ENST00000229330 NDUFS7O75251 213 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 MRPL35Q9NZE8 188 aaKnown RBP11.12□□□□□ -0.63
HCFC2-201ENST00000229330 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 B5MCH6 92 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 TCF15Q12870 199 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
HCFC2-201ENST00000229330 NPYP01303 97 aa11.11□□□□□ -0.63
HCFC2-201ENST00000229330 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
HCFC2-201ENST00000229330 PCP2Q8IVA1 136 aa11.11□□□□□ -0.63
HCFC2-201ENST00000229330 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
HCFC2-201ENST00000229330 ATP5J2P56134 94 aa11.11□□□□□ -0.63
HCFC2-201ENST00000229330 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 PAX8Q06710 450 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 SSC4DQ8WTU2 575 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 ERCC8Q13216 396 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 ZNF318Q5VUA4 2279 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 SLC25A20O43772 301 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
HCFC2-201ENST00000229330 G3V4G9 280 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 LINC01587Q99440 93 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 LTAP01374 205 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 FGF6P10767 208 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 Q8NFD4 153 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 PLXNA2O75051 1894 aa11.09□□□□□ -0.63
HCFC2-201ENST00000229330 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 F8VRH5 84 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 DUSP14O95147 198 aaKnown RBP11.08□□□□□ -0.64
HCFC2-201ENST00000229330 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 CRPP02741 224 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 WDR86Q86TI4 376 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 TICRRQ7Z2Z1 1910 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-201ENST00000229330 DIDO1Q9BTC0 2240 aaKnown RBP11.08□□□□□ -0.64
HCFC2-201ENST00000229330 IGLL5B9A064 214 aa11.08□□□□□ -0.64
HCFC2-201ENST00000229330 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 SPXQ9BT56 116 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 TMEM178BH3BS89 294 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 FCN3O75636 299 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
HCFC2-201ENST00000229330 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 NOTCH4Q99466 2003 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
HCFC2-201ENST00000229330 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 SRRM4A7MD48 611 aaKnown RBP11.06□□□□□ -0.64
HCFC2-201ENST00000229330 GHRHP01286 108 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 PMVKQ15126 192 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 RNASE6Q93091 150 aaKnown RBP11.06□□□□□ -0.64
HCFC2-201ENST00000229330 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 LYNX1G3V0Z9 82 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 LYNX1P0DP58 116 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 LINC00158P58513 81 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 CCL19Q99731 98 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 HELZP42694 1942 aaKnown RBP11.06□□□□□ -0.64
HCFC2-201ENST00000229330 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 PRR25Q96S07 402 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 MDS2Q8NDY4 140 aa11.06□□□□□ -0.64
HCFC2-201ENST00000229330 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 A0A087WX48 190 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 RASL10AQ92737 203 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 THAP8Q8NA92 274 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms