RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CCDC144NLQ6NUI1 221 aa13.96□□□□□ -0.18
CDKN1B-201ENST00000228872 GFRALQ6UXV0 394 aa13.96□□□□□ -0.18
CDKN1B-201ENST00000228872 ZNF474Q6S9Z5 364 aaPredicted RBP13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 RITA1Q96K30 269 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 SPTBN4Q9H254 2564 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 ZGRF1Q86YA3 2104 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 F8W1H4 67 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 J3QR89 54 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 APELAP0DMC3 54 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 Q5PR19 223 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 FAM169BQ8N8A8 192 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 C17orf77Q96MU5 243 aa13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 NHP2Q9NX24 153 aaKnown RBP13.95□□□□□ -0.18
CDKN1B-201ENST00000228872 TMEM238LA0A1B0GVL6 79 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 NPYP01303 97 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 TNFAIP6P98066 277 aaPredicted RBP13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 E9PLD3 99 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 TMEM108Q6UXF1 575 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 ICE1Q9Y2F5 2266 aa13.94□□□□□ -0.18
CDKN1B-201ENST00000228872 TMSB15BA0A087X1C1 80 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 K7EQM0 130 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 M0R1B8 84 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 PRR30Q53SZ7 412 aaPredicted RBP13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 C8orf49Q96NF6 230 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 PLCE1Q9P212 2302 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 GLRXP35754 106 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 PSMG4Q5JS54 123 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 SIGLEC15Q6ZMC9 328 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 HHLA3Q9XRX5 114 aa13.93□□□□□ -0.18
CDKN1B-201ENST00000228872 SPAG8Q99932 426 aaPredicted RBP13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 TM2D2Q9BX73 214 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 NGBQ9NPG2 151 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 IGLV3-9A0A075B6K5 115 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 SHISA9B4DS77 424 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 IGLL5B9A064 214 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 IGHV1-46P01743 117 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 CKS2P33552 79 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 RPL27AP46776 148 aaKnown RBP13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 RAB9AP51151 201 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 ODF1Q14990 250 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 CEND1Q8N111 149 aa13.92□□□□□ -0.18
CDKN1B-201ENST00000228872 TRBV25-1A0A075B6N4 114 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 KLRB1Q12918 225 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 SH2D6Q7Z4S9 175 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 TMEM190Q8WZ59 177 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 TMEM133Q9H2Q1 129 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
CDKN1B-201ENST00000228872 K7EMI3 77 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 C3orf36Q3SXR2 165 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 TEX36Q5VZQ5 186 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 PLXNB1O43157 2135 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 A0A0G2JNJ9 132 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 CKS1BP61024 79 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 Q9UFV3 132 aa13.9□□□□□ -0.18
CDKN1B-201ENST00000228872 PRSS47A8MTI9 375 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 VSTM5A8MXK1 200 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 ETDBQ3ZM63 59 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 TMEM200BQ69YZ2 307 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 WFDC12Q8WWY7 111 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 SMG1Q96Q15 3661 aaKnown RBP13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 PCNX1Q96RV3 2341 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 C16orf97H3BN30 126 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 ENSAO43768 121 aaKnown RBP13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 SH2D1AO60880 128 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 THBDP07204 575 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 ZNF479Q96JC4 524 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 SHANK2-AS3Q9BTD1 123 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 PRORYQ9H606 182 aa13.89□□□□□ -0.19
CDKN1B-201ENST00000228872 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 H3BMG7 143 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 M0R3E3 92 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 LYPD1Q8N2G4 141 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 IGKCP01834 107 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 EVI2AP22794 236 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 TCTEX1D4Q5JR98 221 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 GTSCR1Q86UQ5 136 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 LINC00311Q8N616 119 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 IGF2RP11717 2491 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 ADGRG4Q8IZF6 3080 aa13.88□□□□□ -0.19
CDKN1B-201ENST00000228872 FCN3O75636 299 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 RBP4P02753 201 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 SCGB2A2Q13296 93 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 RASL11BQ9BPW5 248 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 H3BRN7 92 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 MC5RP33032 325 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 SRSF1Q07955 248 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 FAM27E3Q08E93 113 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 LEPP41159 167 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
CDKN1B-201ENST00000228872 LINC01546A6NGU7 62 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 IGKV1-17P01599 117 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 PRSS1P07477 247 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms