RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ST20Q9HBF5 79 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 CENPVL3A0A0U1RRI6 287 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 ATP6V0E1O15342 81 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 ECSCRQ19T08 205 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 LYZL1Q6UWQ5 148 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 ATP6V0BQ99437 205 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 LAMTOR2Q9Y2Q5 125 aa17.07■□□□□ 0.32
SMARCD2-201ENST00000225742 RBAKDNA6NC62 111 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 OR4C46A6NHA9 309 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 TSPOP30536 169 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 GPR183P32249 361 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 SPATA12Q7Z6I5 190 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 EEF1AKMT3Q96AZ1 226 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 BPESC1Q9GZL8 116 aa17.06■□□□□ 0.32
SMARCD2-201ENST00000225742 KALRNO60229 2985 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 TRBV7-1A0A0A6YYK4 115 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 IGHG4P01861 327 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 IGLL1P15814 213 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 GAGE1Q13065 139 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 LY6DQ14210 128 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 SLC50A1Q9BRV3 221 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 AP5S1Q9NUS5 200 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 CLEC3BP05452 202 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 ZNF25P17030 456 aaPredicted RBP17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 BATFQ16520 125 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 MAJINQ3KP22 176 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 FAM104BQ5XKR9 115 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 FA2HQ7L5A8 372 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 TPPP3Q9BW30 176 aa17.05■□□□□ 0.32
SMARCD2-201ENST00000225742 BUB3O43684 328 aa17.04■□□□□ 0.32
SMARCD2-201ENST00000225742 PRSS3P2Q8NHM4 247 aa17.03■□□□□ 0.32
SMARCD2-201ENST00000225742 VGLL1Q99990 258 aa17.03■□□□□ 0.32
SMARCD2-201ENST00000225742 LINC00173Q6ZV60 143 aa17.03■□□□□ 0.32
SMARCD2-201ENST00000225742 IGLC6P0CF74 106 aa17.02■□□□□ 0.31
SMARCD2-201ENST00000225742 ZNF138P52744 262 aa17.02■□□□□ 0.31
SMARCD2-201ENST00000225742 C5orf56Q8N8D9 126 aa17.02■□□□□ 0.31
SMARCD2-201ENST00000225742 FER1L6-AS1Q8NA97 138 aa17.02■□□□□ 0.31
SMARCD2-201ENST00000225742 OR10AG1Q8NH19 301 aa17.02■□□□□ 0.31
SMARCD2-201ENST00000225742 HSBP1L1C9JCN9 74 aa17.01■□□□□ 0.31
SMARCD2-201ENST00000225742 CSN3P07498 182 aa17.01■□□□□ 0.31
SMARCD2-201ENST00000225742 ORMDL3Q8N138 153 aa17.01■□□□□ 0.31
SMARCD2-201ENST00000225742 MRPL53Q96EL3 112 aaKnown RBP17.01■□□□□ 0.31
SMARCD2-201ENST00000225742 CCDC140Q96MF4 163 aa17.01■□□□□ 0.31
SMARCD2-201ENST00000225742 TMSB15BA0A087X1C1 80 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 FABP5P3A8MUU1 101 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 DLEU1O43261 78 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 G0S2P27469 103 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 PAX8Q06710 450 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 CRIP2P52943 208 aaPredicted RBP17■□□□□ 0.31
SMARCD2-201ENST00000225742 PRELID3AQ96N28 172 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 TMEM208Q9BTX3 173 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 MS4A6AQ9H2W1 248 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 MOB4Q9Y3A3 225 aa17■□□□□ 0.31
SMARCD2-201ENST00000225742 TMEM213A2RRL7 107 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 CLPSL1A2RUU4 121 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 LINC01545Q5VT33 79 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 CLEC19AQ6UXS0 136 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 METTL26Q96S19 204 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 HIF1ANQ9NWT6 349 aa16.99■□□□□ 0.31
SMARCD2-201ENST00000225742 D6R8Y8 96 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 PRB4P10163 310 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 IGF2RP11717 2491 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 ZNF80P51504 273 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 ATP5G2Q06055 141 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 Q8TAT8 98 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 ZNF747Q9BV97 191 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 CNFNQ9BYD5 112 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 U3KQE9 123 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 FAM223BA6NKX1 122 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 HLA-DMBP28068 263 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 FAM223AQ8IWN6 122 aa16.98■□□□□ 0.31
SMARCD2-201ENST00000225742 G3V318 75 aa16.97■□□□□ 0.31
SMARCD2-201ENST00000225742 C19orf84I3L1E1 186 aa16.97■□□□□ 0.31
SMARCD2-201ENST00000225742 IGHV4-39P01824 125 aa16.97■□□□□ 0.31
SMARCD2-201ENST00000225742 LINC01559Q495D7 138 aa16.97■□□□□ 0.31
SMARCD2-201ENST00000225742 MRPL51Q4U2R6 128 aaKnown RBP16.97■□□□□ 0.31
SMARCD2-201ENST00000225742 IGHV3-35A0A0C4DH35 117 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 C19orf54Q5BKX5 351 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 IGFL4Q6B9Z1 124 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 AMN1Q8IY45 258 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 STPG4Q8N801 248 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 SIGLEC8Q9NYZ4 499 aa16.96■□□□□ 0.31
SMARCD2-201ENST00000225742 GNLYP22749 145 aa16.96■□□□□ 0.3
SMARCD2-201ENST00000225742 HIST1H1AQ02539 215 aaPredicted RBP16.96■□□□□ 0.3
SMARCD2-201ENST00000225742 TWIST1Q15672 202 aa16.96■□□□□ 0.3
SMARCD2-201ENST00000225742 ZZEF1O43149 2961 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 IGHV3OR16-8A0A075B7F1 116 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 TRAV41A0A0B4J266 112 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 IGHV1-69DA0A0B4J2H0 117 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 LINC01548A6NM66 108 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 IGHV1-69P01742 117 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 IFI27P40305 119 aaPredicted RBP16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 PSMG3-AS1Q96PY0 264 aa16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 HRNRQ86YZ3 2850 aaPredicted RBP16.95■□□□□ 0.3
SMARCD2-201ENST00000225742 ORM1P02763 201 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 PPBPP02775 128 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 UQCRFS1P47985 274 aa16.94■□□□□ 0.3
SMARCD2-201ENST00000225742 ZNF124Q15973 351 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms