RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 FAM201AQ5SY85 155 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
GABPB1-201ENST00000220429 TRAV4A0A0B4J268 109 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 FAM106AQ4KMX7 169 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 NABP2Q9BQ15 211 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
GABPB1-201ENST00000220429 PSMG4Q5JS54 123 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 CEP295Q9C0D2 2601 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 TET2Q6N021 2002 aaPredicted RBP10.83□□□□□ -0.68
GABPB1-201ENST00000220429 EVI2AP22794 236 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 PRR30Q53SZ7 412 aaPredicted RBP10.83□□□□□ -0.68
GABPB1-201ENST00000220429 Q6Q795 121 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 DKK2Q9UBU2 259 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 KALRNO60229 2985 aa10.83□□□□□ -0.68
GABPB1-201ENST00000220429 TGFAP01135 160 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 MYOD1P15172 320 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 DUTP33316 252 aaKnown RBP10.82□□□□□ -0.68
GABPB1-201ENST00000220429 LOXL3P58215 753 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 LOXL1Q08397 574 aaPredicted RBP10.82□□□□□ -0.68
GABPB1-201ENST00000220429 PPP1R27Q86WC6 154 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 PEX7O00628 323 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 CD40P25942 277 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 GATA4P43694 442 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 TAL2Q16559 108 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 CT83Q5H943 113 aa10.82□□□□□ -0.68
GABPB1-201ENST00000220429 GFRA3O60609 400 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 IFI27P40305 119 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-201ENST00000220429 ZNF134P52741 427 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 ATP5IP56385 69 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-201ENST00000220429 UTF1Q5T230 341 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-201ENST00000220429 RASL10AQ92737 203 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 FAM234AQ9H0X4 552 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 A0A0G2JNJ9 132 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 LINC01548A6NM66 108 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 IGHV1-46P01743 117 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 PRSS22Q9GZN4 317 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 UBTD1Q9HAC8 227 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 Q9UFV3 132 aa10.81□□□□□ -0.68
GABPB1-201ENST00000220429 HAX1O00165 279 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 MOSP00540 346 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 P01737 135 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 RASL11BQ9BPW5 248 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 TPPP3Q9BW30 176 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 FCGR3BO75015 233 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 CRLF1O75462 422 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 CGB3P0DN86 165 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 CGB7P0DN87 165 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 PSMB2P49721 201 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 ASCL5Q7RTU5 278 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 Q8NA96 180 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
GABPB1-201ENST00000220429 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 CALYQ9NYX4 217 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 RNF7Q9UBF6 113 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
GABPB1-201ENST00000220429 NDUFS7O75251 213 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 C8orf88P0DMB2 117 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 TNFAIP6P98066 277 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-201ENST00000220429 LINC00322Q6ZN03 302 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-201ENST00000220429 RND1Q92730 232 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 COL8A1P27658 744 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 ASIPP42127 132 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
GABPB1-201ENST00000220429 C17orf58Q2M2W7 97 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 MORN3Q6PF18 240 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-201ENST00000220429 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-201ENST00000220429 MOB3BQ86TA1 216 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 C3orf56Q8N813 242 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 PKDREJQ9NTG1 2253 aa10.79□□□□□ -0.68
GABPB1-201ENST00000220429 HBDP02042 147 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 ZNF329Q86UD4 541 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 DEFB108BQ8NET1 73 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 LEAP2Q969E1 77 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 HHLA3Q9XRX5 114 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 AGRNO00468 2067 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 TLN1Q9Y490 2541 aaKnown RBP10.78□□□□□ -0.68
GABPB1-201ENST00000220429 IL4P05112 153 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 FCER1GP30273 86 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 POLEQ07864 2286 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 PTPRQQ9UMZ3 2332 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 FXYD7P58549 80 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-201ENST00000220429 NUP37Q8NFH4 326 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
GABPB1-201ENST00000220429 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms