RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CLEC5AQ9NY25 188 aa20.21■□□□□ 0.83
CHMP4B-201ENST00000217402 FAM74A7A6NL05 159 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 PAGE4O60829 102 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 A0A1W2PRE2 83 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 NMBP08949 121 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 ACTL10Q5JWF8 245 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 GDF5OSQ5U4N7 250 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 CST9LP1Q5W188 147 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 CITED4Q96RK1 184 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 RPH3ALQ9UNE2 315 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 PRELID1Q9Y255 219 aa20.2■□□□□ 0.82
CHMP4B-201ENST00000217402 PRAC2D3DTV9 90 aa20.19■□□□□ 0.82
CHMP4B-201ENST00000217402 PPT1P50897 306 aa20.19■□□□□ 0.82
CHMP4B-201ENST00000217402 SUMO1P63165 101 aaKnown RBP20.19■□□□□ 0.82
CHMP4B-201ENST00000217402 SLC25A5P05141 298 aaKnown RBP20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 ZNF705DP0CH99 300 aaPredicted RBP20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 ZNF705BP0CI00 300 aaPredicted RBP20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 LYPD6BQ8NI32 183 aa20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 CMTM2Q8TAZ6 248 aa20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 MRPL53Q96EL3 112 aaKnown RBP20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 SRD5A3Q9H8P0 318 aa20.18■□□□□ 0.82
CHMP4B-201ENST00000217402 FOXI2Q6ZQN5 318 aa20.17■□□□□ 0.82
CHMP4B-201ENST00000217402 SAV1Q9H4B6 383 aaPredicted RBP20.17■□□□□ 0.82
CHMP4B-201ENST00000217402 MANBALQ9NQG1 85 aa20.17■□□□□ 0.82
CHMP4B-201ENST00000217402 CSN1S1P47710 185 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 ATP5G3P48201 142 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 GNG5P63218 68 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 EBLN2Q6P2I7 272 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 K7EIL1 84 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 IGHV4-30-4P0DP06 118 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 RAB14P61106 215 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 HAGHQ16775 308 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 ARL2-SNX15V9GYD0 113 aa20.16■□□□□ 0.82
CHMP4B-201ENST00000217402 A0A0J9YX75 114 aa20.15■□□□□ 0.82
CHMP4B-201ENST00000217402 IFNA1P01562 189 aa20.15■□□□□ 0.82
CHMP4B-201ENST00000217402 HIST1H1AQ02539 215 aaPredicted RBP20.15■□□□□ 0.82
CHMP4B-201ENST00000217402 OR8A1Q8NGG7 326 aa20.15■□□□□ 0.82
CHMP4B-201ENST00000217402 TUBA4BQ9H853 241 aa20.15■□□□□ 0.82
CHMP4B-201ENST00000217402 IGKV2-40A0A087WW87 121 aaPredicted RBP20.14■□□□□ 0.81
CHMP4B-201ENST00000217402 IGKV2D-40P01614 121 aaPredicted RBP20.14■□□□□ 0.81
CHMP4B-201ENST00000217402 STHQ8IWL8 128 aa20.14■□□□□ 0.81
CHMP4B-201ENST00000217402 C5orf17Q8NAS9 161 aa20.14■□□□□ 0.81
CHMP4B-201ENST00000217402 RXFP4Q8TDU9 374 aa20.14■□□□□ 0.81
CHMP4B-201ENST00000217402 IGKV3-20P01619 116 aa20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 HLA-DRB4P13762 266 aa20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 NKX6-2Q9C056 277 aaPredicted RBP20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 HLA-DRB4X5D2U9 266 aa20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 BCL2P10415 239 aa20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 OR4B1Q8NGF8 309 aa20.13■□□□□ 0.81
CHMP4B-201ENST00000217402 DIRC3C9JPN6 131 aa20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 C11orf94C9JXX5 98 aa20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 H3BMM0 161 aa20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 RPL35AP18077 110 aaKnown RBP20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 CNN1P51911 297 aaKnown RBP20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 OR10J6PQ8NGY7 276 aa20.12■□□□□ 0.81
CHMP4B-201ENST00000217402 GOLT1AQ6ZVE7 132 aa20.11■□□□□ 0.81
CHMP4B-201ENST00000217402 EPDR1Q9UM22 224 aa20.11■□□□□ 0.81
CHMP4B-201ENST00000217402 ERCC8Q13216 396 aa20.1■□□□□ 0.81
CHMP4B-201ENST00000217402 PMS2P11Q13670 270 aa20.1■□□□□ 0.81
CHMP4B-201ENST00000217402 CCDC28AQ8IWP9 274 aa20.1■□□□□ 0.81
CHMP4B-201ENST00000217402 AGRNO00468 2067 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 TCRAP04437 139 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 TRPT1Q86TN4 253 aaKnown RBP20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 RBMY1BA6NDE4 496 aaKnown RBP20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 RBMY1EA6NEQ0 496 aaKnown RBP20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 RBMY1DP0C7P1 496 aaKnown RBP20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 DEFB121Q5J5C9 76 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 CLLU1Q5K131 121 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 RARRES2Q99969 163 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 VGLL1Q99990 258 aa20.09■□□□□ 0.81
CHMP4B-201ENST00000217402 LOC102723971A0A1B0GUV8 181 aa20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 RGS13O14921 159 aa20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 DUSP14O95147 198 aaKnown RBP20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 DEFA6Q01524 100 aa20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 MEF2BQ02080 365 aaPredicted RBP20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 VAX2Q9UIW0 290 aa20.08■□□□□ 0.8
CHMP4B-201ENST00000217402 RBFOX3A6NFN3 312 aa20.07■□□□□ 0.8
CHMP4B-201ENST00000217402 TOR2AQ5JU69 321 aa20.07■□□□□ 0.8
CHMP4B-201ENST00000217402 ATG101Q9BSB4 218 aa20.07■□□□□ 0.8
CHMP4B-201ENST00000217402 NPIPB6E9PJ23 425 aa20.06■□□□□ 0.8
CHMP4B-201ENST00000217402 PEX7O00628 323 aa20.06■□□□□ 0.8
CHMP4B-201ENST00000217402 ARL6IP6Q8N6S5 226 aa20.06■□□□□ 0.8
CHMP4B-201ENST00000217402 MRAPQ8TCY5 172 aa20.06■□□□□ 0.8
CHMP4B-201ENST00000217402 TRAV8-1A0A0A6YYK1 113 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 SCO2A0A1W2PP80 73 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 FRMD6-AS1P0C7T7 363 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 TAGLN2P37802 199 aaKnown RBP20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 CYB561D1Q8N8Q1 229 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 SGK494Q96LW2 274 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 FAM210AQ96ND0 272 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 EIF5A2Q9GZV4 153 aaKnown RBP20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 AGPAT4-IT1Q9H0P7 198 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 LOC102724200A0A096LPH7 203 aaPredicted RBP20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 HIST1H2BAQ96A08 127 aa20.05■□□□□ 0.8
CHMP4B-201ENST00000217402 RBAKDNA6NC62 111 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 A8MZ25 164 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 TMEM78Q5T7P6 136 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 C9orf47Q6ZRZ4 202 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 Q8TAT8 98 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 LINC00479Q96M42 142 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms