RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PCNPQ8WW12 178 aaKnown RBP7.09□□□□□ -1.27
PHGDH-228ENST00000641847 GLMPQ8WWB7 406 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 FAM167A-AS1Q96KT0 104 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 RHPN1-AS1Q9BWJ2 59 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 SELENOKQ9Y6D0 94 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 SMAD5-AS1Q9Y6J3 95 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 RGS13O14921 159 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 H2AFB1P0C5Y9 115 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 PYYP10082 97 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 GP9P14770 177 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 RPL7P18124 248 aaKnown RBP7.08□□□□□ -1.28
PHGDH-228ENST00000641847 UBE2L3P68036 154 aaKnown RBP7.08□□□□□ -1.28
PHGDH-228ENST00000641847 BLOC1S1P78537 153 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 C1orf194Q5T5A4 169 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 SIGLEC15Q6ZMC9 328 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 SAT2Q96F10 170 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-228ENST00000641847 ZNF503Q96F45 646 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 PRR25Q96S07 402 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 PAXXQ9BUH6 204 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 OR51M1Q9H341 326 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 TMEM14CQ9P0S9 112 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 MLXQ9UH92 298 aa7.08□□□□□ -1.28
PHGDH-228ENST00000641847 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
PHGDH-228ENST00000641847 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 HELTA6NFD8 242 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 TEX46H3BTG2 121 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 MRPS12O15235 138 aaKnown RBP7.07□□□□□ -1.28
PHGDH-228ENST00000641847 SAP30O75446 220 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 CXorf1O96002 111 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 HBE1P02100 147 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 NMBP08949 121 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 ATF4P18848 351 aaPredicted RBP7.07□□□□□ -1.28
PHGDH-228ENST00000641847 GCHFRP30047 84 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 GALR1P47211 349 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 RAB14P61106 215 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 C9orf66Q5T8R8 295 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 PQLC2Q6ZP29 291 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 TCF24Q7RTU0 167 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 STXBP6Q8NFX7 210 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 GPR82Q96P67 336 aa7.07□□□□□ -1.28
PHGDH-228ENST00000641847 ZNF785A8K8V0 405 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 SNRPCP09234 159 aaKnown RBP7.06□□□□□ -1.28
PHGDH-228ENST00000641847 OR10J4P0C629 311 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
PHGDH-228ENST00000641847 CLLU1Q5K131 121 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 FXYD5Q96DB9 178 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 HRH4Q9H3N8 390 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 TMPRSS5Q9H3S3 457 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 TMEM167BQ9NRX6 74 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
PHGDH-228ENST00000641847 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 A0A087X0K7 114 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 H3BQ15 152 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 H3BTX0 84 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 HIST1H1EP10412 219 aaKnown RBP7.05□□□□□ -1.28
PHGDH-228ENST00000641847 CCL20P78556 96 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 DEFB114Q30KQ6 69 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 CD300EQ496F6 205 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-228ENST00000641847 FAM90A2PQ658T7 463 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 BLNKQ8WV28 456 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
PHGDH-228ENST00000641847 ZNF256Q9Y2P7 627 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-228ENST00000641847 TRBV19A0A075B6N1 114 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 SLC17A3O00476 420 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 IFNA1P01562 189 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 CD5P06127 495 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 TFPI2P48307 235 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 PSMB3P49720 205 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 MEOX2P50222 304 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 GUK1Q16774 197 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
PHGDH-228ENST00000641847 SBSPONQ8IVN8 264 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 TMEM61Q8N0U2 210 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 LYPD6BQ8NI32 183 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 C17orf77Q96MU5 243 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 NRN1Q9NPD7 142 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 GNG13Q9P2W3 67 aa7.04□□□□□ -1.28
PHGDH-228ENST00000641847 NDUFB4O95168 129 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 IGLV1-51P01701 117 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 NBEAP1P0C6P0 100 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 PPT1P50897 306 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 UBE2G2P60604 165 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 PDE6HQ13956 83 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 SAMD13Q5VXD3 122 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 OR2K2Q8NGT1 345 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 IL17DQ8TAD2 202 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 SUN5Q8TC36 379 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 C16orf92Q96LL3 132 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 MANBALQ9NQG1 85 aa7.03□□□□□ -1.28
PHGDH-228ENST00000641847 YTHDF2Q9Y5A9 579 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms