RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	ZFAND6	Q6FIF0	208 aa		10.38	□□□□□ -0.75
SDHD-209	ENST00000640554	SCGB1C1	Q8TD33	95 aa		10.38	□□□□□ -0.75
SDHD-209	ENST00000640554	C20orf173	Q96LM9	149 aa		10.38	□□□□□ -0.75
SDHD-209	ENST00000640554	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.38	□□□□□ -0.75
SDHD-209	ENST00000640554	TMEM14C	Q9P0S9	112 aa		10.38	□□□□□ -0.75
SDHD-209	ENST00000640554	SMIM9	A6NGZ8	99 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	ZNF253	O75346	499 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	GIP	P09681	153 aa	Predicted RBP	10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	IGLC2	P0DOY2	106 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	FCN2	Q15485	313 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	GDF5OS	Q5U4N7	250 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	ZNF738	Q8NE65	137 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	NEU1	Q99519	415 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	XCL2	Q9UBD3	114 aa		10.37	□□□□□ -0.75
SDHD-209	ENST00000640554	OXA1L	Q15070	435 aa		10.36	□□□□□ -0.75
SDHD-209	ENST00000640554	OR11H7	Q8NGC8	314 aa		10.36	□□□□□ -0.75
SDHD-209	ENST00000640554	MRPL32	Q9BYC8	188 aa	Known RBP	10.36	□□□□□ -0.75
SDHD-209	ENST00000640554	NUPR2	A6NF83	97 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554		F6UB75	175 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	IGKV3-20	P01619	116 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	HIST1H1E	P10412	219 aa	Known RBP	10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	PDE6H	Q13956	83 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	RNF182	Q8N6D2	247 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554		Q8NAQ8	132 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	OR8A1	Q8NGG7	326 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	C11orf45	Q8TAV5	145 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	SAT2	Q96F10	170 aa	Predicted RBP	10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	GOLT1B	Q9Y3E0	138 aa		10.35	□□□□□ -0.75
SDHD-209	ENST00000640554	DNAH7	Q8WXX0	4024 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	TRAV5	A0A0B4J249	113 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	TMEM189	A5PLL7	270 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	CXorf65	A6NEN9	183 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	CNN1	P51911	297 aa	Known RBP	10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	DEFB1	P60022	68 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	MORN5	Q5VZ52	161 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	IGFL4	Q6B9Z1	124 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	RPUSD4	Q96CM3	377 aa	Known RBP	10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	PPP1R14D	Q9NXH3	145 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	PRELID1	Q9Y255	219 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	KLK5	Q9Y337	293 aa	Predicted RBP	10.34	□□□□□ -0.75
SDHD-209	ENST00000640554		X6R8D5	127 aa		10.34	□□□□□ -0.75
SDHD-209	ENST00000640554	IGHV4-28	A0A0C4DH34	117 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554		H3BQ15	152 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	ZNF705D	P0CH99	300 aa	Predicted RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	ZNF705B	P0CI00	300 aa	Predicted RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	ZNF266	Q14584	549 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	AMTN	Q6UX39	209 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	MRPL53	Q96EL3	112 aa	Known RBP	10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	IGF2BP2-AS1	Q96M15	143 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	AQP10	Q96PS8	301 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	SLC35B3	Q9H1N7	401 aa		10.33	□□□□□ -0.76
SDHD-209	ENST00000640554	TRBV19	A0A075B6N1	114 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	RHOB	P62745	196 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	HIST1H1A	Q02539	215 aa	Predicted RBP	10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	OR10J6P	Q8NGY7	276 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	SMIM3	Q9BZL3	60 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	ZNF586	Q9NXT0	402 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	FUT9	Q9Y231	359 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	TIMM9	Q9Y5J7	89 aa		10.32	□□□□□ -0.76
SDHD-209	ENST00000640554	BOLA2-SMG1P6	H3BVE0	249 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	JTB	O76095	146 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	RBMY1A1	P0DJD3	496 aa	Known RBP	10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	RBMY1C	P0DJD4	496 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	TSPO	P30536	169 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	TAS2R45	P59539	299 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	RBMY1F	Q15415	496 aa	Known RBP	10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	GCSAML	Q5JQS6	135 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	FFAR4	Q5NUL3	377 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	OR51M1	Q9H341	326 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	AAMDC	Q9H7C9	122 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	RFNG	Q9Y644	331 aa		10.31	□□□□□ -0.76
SDHD-209	ENST00000640554	AGRN	O00468	2067 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	TEX48	A0A1B0GUV7	120 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	C11orf94	C9JXX5	98 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	INS	P01308	110 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	NBEAP1	P0C6P0	100 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	HLA-DMB	P28068	263 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	FXYD7	P58549	80 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	PMS2P11	Q13670	270 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	TMEM256	Q8N2U0	113 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	OR2T35	Q8NGX2	323 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	FAM167A-AS1	Q96KT0	104 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	TMEM208	Q9BTX3	173 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	WFDC1	Q9HC57	220 aa		10.3	□□□□□ -0.76
SDHD-209	ENST00000640554	LCE6A	A0A183	80 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	SLC17A3	O00476	420 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	DEFB4A	O15263	64 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	HBE1	P02100	147 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	M6PR	P20645	277 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	TCTA	P57738	103 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	RRN3P1	Q2M238	152 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	KHDC3L	Q587J8	217 aa		10.29	□□□□□ -0.76
SDHD-209	ENST00000640554	MIR17HG	Q75NE6	70 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms