RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
PNKP-231ENST00000640501 LINC00479Q96M42 142 aa6.48□□□□□ -1.37
PNKP-231ENST00000640501 MS4A10Q96PG2 267 aa6.48□□□□□ -1.37
PNKP-231ENST00000640501 MLST8Q9BVC4 326 aa6.48□□□□□ -1.37
PNKP-231ENST00000640501 PSG8Q9UQ74 426 aa6.48□□□□□ -1.37
PNKP-231ENST00000640501 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 WNK2Q9Y3S1 2297 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 RBAKDNA6NC62 111 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 H3BTX0 84 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 MRPS12O15235 138 aaKnown RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 BUB3O43684 328 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 PF4V1P10720 104 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 FABP4P15090 132 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 ADMP35318 185 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 PAFAH1B2P68402 229 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 C19orf54Q5BKX5 351 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 Q5PR19 223 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 CYB5R2Q6BCY4 276 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 C9orf139Q6ZV77 190 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 MRPL53Q96EL3 112 aaKnown RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
PNKP-231ENST00000640501 GPR61Q9BZJ8 451 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
PNKP-231ENST00000640501 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 APCSP02743 223 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 SNRPCP09234 159 aaKnown RBP6.46□□□□□ -1.38
PNKP-231ENST00000640501 CBLN1P23435 193 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 TCL1AP56279 114 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 HBBP68871 147 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 Q0VG73 95 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 DCHS2Q6V1P9 2916 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 CCDC140Q96MF4 163 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 PRSS22Q9GZN4 317 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 NPFFR1Q9GZQ6 430 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 FLNCQ14315 2725 aa6.46□□□□□ -1.38
PNKP-231ENST00000640501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.45□□□□□ -1.38
PNKP-231ENST00000640501 RNF223E7ERA6 249 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 PPIFP30405 207 aaKnown RBP6.45□□□□□ -1.38
PNKP-231ENST00000640501 RIGQ13278 110 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 SCGB2A2Q13296 93 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 MRPL54Q6P161 138 aaKnown RBP6.45□□□□□ -1.38
PNKP-231ENST00000640501 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 COX8CQ7Z4L0 72 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 NUP35Q8NFH5 326 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 NEU1Q99519 415 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 HIST1H2BLQ99880 126 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 NIT2Q9NQR4 276 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 VPREB3Q9UKI3 123 aa6.45□□□□□ -1.38
PNKP-231ENST00000640501 TMEM189A5PLL7 270 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 SH2D7A6NKC9 451 aaPredicted RBP6.44□□□□□ -1.38
PNKP-231ENST00000640501 J3QKU1 62 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 CHEK1O14757 476 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 SPINK4O60575 86 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 IGLV2-11P01706 119 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 IGHV4-31P0DP07 118 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
PNKP-231ENST00000640501 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
PNKP-231ENST00000640501 SRSF1Q07955 248 aaKnown RBP eCLIP6.44□□□□□ -1.38
PNKP-231ENST00000640501 DEFB112Q30KQ8 113 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 TMEM78Q5T7P6 136 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 DMRTA1Q5VZB9 504 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 LCN12Q6JVE5 192 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 OR4X2Q8NGF9 303 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 NRGNQ92686 78 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 SGK494Q96LW2 274 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 UFC1Q9Y3C8 167 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 TACC2O95359 2948 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 ZNF462Q96JM2 2506 aa6.44□□□□□ -1.38
PNKP-231ENST00000640501 USP9XQ93008 2570 aaPredicted RBP6.44□□□□□ -1.38
PNKP-231ENST00000640501 SMG1Q96Q15 3661 aaKnown RBP6.43□□□□□ -1.38
PNKP-231ENST00000640501 ANKRD17O75179 2603 aaKnown RBP6.43□□□□□ -1.38
PNKP-231ENST00000640501 ABCA2Q9BZC7 2435 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 A0A096LNT2 108 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 TRAV8-1A0A0A6YYK1 113 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 A0A1B0GUT8 65 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 LINC01548A6NM66 108 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 K7EMT4 169 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 ESDP10768 282 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 RAB4AP20338 218 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 ZC2HC1AQ96GY0 325 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 C16orf92Q96LL3 132 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 Q96MF0 132 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 C17orf77Q96MU5 243 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 PRR25Q96S07 402 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 ASCL2Q99929 193 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 SAMD10Q9BYL1 202 aa6.43□□□□□ -1.38
PNKP-231ENST00000640501 PEF1Q9UBV8 284 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms