RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 PTPRDP23468 1912 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 INSP01308 110 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 SLC25A16P16260 332 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 RASL11AQ6T310 242 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
HNRNPU-226ENST00000640218 A0A087WWL8 130 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 DTX1Q86Y01 620 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 A8MWV9 139 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 ATXN8Q156A1 80 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 DOCK8Q8NF50 2099 aa11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 FNDC1Q4ZHG4 1894 aaPredicted RBP11.94□□□□□ -0.5
HNRNPU-226ENST00000640218 OVOL3O00110 214 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 hDV102S1A0JD36 115 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 TMEM155Q4W5P6 130 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 PRTN3P24158 256 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 PLEKHB2Q96CS7 222 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 HS3ST6Q96QI5 342 aa11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
HNRNPU-226ENST00000640218 Q6ZRM9 215 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 TNFSF13O75888 250 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 SEC11AP67812 179 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 RASL10AQ92737 203 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 C1QTNF4Q9BXJ3 329 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 GUSBP1Q15486 140 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 ACACAQ13085 2346 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 DAZ1Q9NQZ3 744 aaKnown RBP11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 A6NNC1 897 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 DIDO1Q9BTC0 2240 aaKnown RBP11.92□□□□□ -0.5
HNRNPU-226ENST00000640218 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 PRSS33Q8NF86 280 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 WISP1O95388 367 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 DEFB130BP0DP73 79 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 DEFB130AP0DP74 79 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 Q6ZS49 121 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 AMN1Q8IY45 258 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 A0A1W2PPI3 338 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 DEFB131AP59861 70 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 BCL6BQ8N143 479 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 LINC00479Q96M42 142 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 ZSWIM8A7E2V4 1837 aa11.91□□□□□ -0.5
HNRNPU-226ENST00000640218 CADP27708 2225 aa11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 MSMBP08118 114 aa11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 LY96Q9Y6Y9 160 aa11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 SIP14410 1827 aa11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 K7ENP7 123 aa11.9□□□□□ -0.5
HNRNPU-226ENST00000640218 ATP6V0E1O15342 81 aa11.9□□□□□ -0.51
HNRNPU-226ENST00000640218 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 SRSF8Q9BRL6 282 aaKnown RBP11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 TICRRQ7Z2Z1 1910 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 DKK1O94907 266 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 A0A087X0K7 114 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 Q86TA4 180 aa11.89□□□□□ -0.51
HNRNPU-226ENST00000640218 NDUFS8O00217 210 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 FNDC10F2Z333 226 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 SPXQ9BT56 116 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 LIME1Q9H400 295 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 ARMS2P0C7Q2 107 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 UBE2E1P51965 193 aa11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 SRSF4Q08170 494 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-226ENST00000640218 C3orf79P0CE67 100 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 FHL1Q13642 323 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 IGKV1-6A0A0C4DH72 117 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 THSD7BQ9C0I4 1608 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 SYS1-DBNDD2H3BUS1 97 aa11.87□□□□□ -0.51
HNRNPU-226ENST00000640218 ROS1P08922 2347 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 CFHR3Q02985 330 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 SS18Q15532 418 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 ANAPC13Q9BS18 74 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 NCOR1O75376 2440 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 KNCNA6PVL3 124 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 LYL1P12980 280 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 NDUFB8O95169 186 aa11.86□□□□□ -0.51
HNRNPU-226ENST00000640218 DOCK10Q96BY6 2186 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms