RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ZNF414Q96IQ9 312 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 PCNX1Q96RV3 2341 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 IL4P05112 153 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 RAB1BQ9H0U4 201 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 ZFHX2Q9C0A1 2572 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 WI2-2373I1.2A0A1W2PRP0 233 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 CRIP1P50238 77 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 HIST1H1AQ02539 215 aaPredicted RBP15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 PDE6HQ13956 83 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 ARL6IP6Q8N6S5 226 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 LAMA5O15230 3695 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 CD5LO43866 347 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 CSN1S1P47710 185 aa15.85■□□□□ 0.13
SYNGAP1-227ENST00000638142 NBR2O15453 112 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 PPBPP02775 128 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 CT45A10P0DMU9 189 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 ZNF493Q6ZR52 646 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 FA2HQ7L5A8 372 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 OR10AG1Q8NH19 301 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 ZNF747Q9BV97 191 aa15.84■□□□□ 0.13
SYNGAP1-227ENST00000638142 OR2T8A6NH00 312 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 FCGR2BP31994 310 aaPredicted RBP15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 PRSS3P2Q8NHM4 247 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 ONECUT1Q9UBC0 465 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 SERTM2A0A1B0GWG4 89 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 COTL1Q14019 142 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 LDLRAD2Q5SZI1 272 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 ERASQ7Z444 233 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 PMCHL2Q9BQD1 86 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 AAMDCQ9H7C9 122 aa15.83■□□□□ 0.12
SYNGAP1-227ENST00000638142 H0Y8G0 127 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 LY6G5BQ8NDX9 201 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 NPBQ8NG41 125 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 ASCL2Q99929 193 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 M0R3E3 92 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 NDUFA3O95167 84 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 MCRIP2Q9BUT9 160 aaKnown RBP15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 DPM3Q9P2X0 92 aa15.82■□□□□ 0.12
SYNGAP1-227ENST00000638142 RIF1Q5UIP0 2472 aaKnown RBP15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 GNG7O60262 68 aa15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 COX8AP10176 69 aa15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 ZNF48Q96MX3 618 aaPredicted RBP15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 TPPP3Q9BW30 176 aa15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 CST9LQ9H4G1 147 aa15.81■□□□□ 0.12
SYNGAP1-227ENST00000638142 GPR183P32249 361 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 RNF151Q2KHN1 245 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 CFHR4Q92496 578 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 TIMM8BQ9Y5J9 83 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 AMMECR1LQ6DCA0 310 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 OR11H6Q8NGC7 330 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 C8orf49Q96NF6 230 aa15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 ANKRD11Q6UB99 2663 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-227ENST00000638142 A0A087X0K7 114 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 CBY3A6NI87 242 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 ARF6P62330 175 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 CEACAM3P40198 252 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 PSG9Q00887 426 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 ZNF672Q499Z4 452 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 OCIAD2Q56VL3 154 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 ADGRG4Q8IZF6 3080 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 PIEZO1Q92508 2521 aa15.79■□□□□ 0.12
SYNGAP1-227ENST00000638142 MFAP4P55083 255 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 PRR30Q53SZ7 412 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 C2orf91Q6ZV80 131 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 VKORC1Q9BQB6 163 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 U3KQK5 164 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 ACACAQ13085 2346 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 BSNQ9UPA5 3926 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 IGLV11-55A0A075B6I3 123 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 TMEM189A5PLL7 270 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 NPIPB5A8MRT5 1133 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 KLF17Q5JT82 389 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 LYZL1Q6UWQ5 148 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 COX8CQ7Z4L0 72 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 HILPDAQ9Y5L2 63 aa15.78■□□□□ 0.12
SYNGAP1-227ENST00000638142 TCF15Q12870 199 aa15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 DPF1Q92782 380 aa15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 FANCD2OSQ96PS1 177 aa15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 PEF1Q9UBV8 284 aaKnown RBP15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 POLEQ07864 2286 aa15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 AKAP13Q12802 2813 aa15.77■□□□□ 0.12
SYNGAP1-227ENST00000638142 IFI27P40305 119 aaPredicted RBP15.77■□□□□ 0.11
SYNGAP1-227ENST00000638142 C5orf64Q2M2E5 130 aa15.77■□□□□ 0.11
SYNGAP1-227ENST00000638142 FAM104BQ5XKR9 115 aa15.77■□□□□ 0.11
SYNGAP1-227ENST00000638142 APC2O95996 2303 aa15.77■□□□□ 0.11
SYNGAP1-227ENST00000638142 D6R8Y8 96 aa15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 SH2D1AO60880 128 aa15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 PTPRZ1P23471 2315 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 S4R3C0 116 aa15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 FBLL1A6NHQ2 334 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 PRB4P10163 310 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 ORMDL3Q8N138 153 aa15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 BCL6BQ8N143 479 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 SIGLEC8Q9NYZ4 499 aa15.76■□□□□ 0.11
SYNGAP1-227ENST00000638142 ZNF292O60281 2723 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 A0A096LNJ9 63 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 NCR2O95944 276 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 SEC11AP67812 179 aa15.75■□□□□ 0.11
SYNGAP1-227ENST00000638142 LINC01560Q8TB33 94 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms