RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 C8orf31Q8N9H6 132 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 FOXS1O43638 330 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 CFHR2P36980 270 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 C17orf100A8MU93 164 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 REPIN1Q9BWE0 567 aaKnown RBP16■□□□□ 0.15
CACNA1A-257ENST00000638009 TCF15Q12870 199 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 hDV102S1A0JD36 115 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 I3L3M4 83 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 MINOS1Q5TGZ0 78 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 MINOS1-NBL1R4GNA1 71 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 TRAV13-1A0A0B4J241 112 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 GZMMP51124 257 aa16■□□□□ 0.15
CACNA1A-257ENST00000638009 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 NRXN2Q9P2S2 1712 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 PMS2P5A8MQ11 134 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 C22orf46C9J442 243 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 SYNJ2BPP57105 145 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 PYY3Q5JQD4 70 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 STPG1Q5TH74 334 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 AMN1Q8IY45 258 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 RNF5Q99942 180 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 ACANP16112 2415 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 KLHDC3Q9BQ90 382 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 SMIM2Q9BVW6 85 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 CFPP27918 469 aa15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 MRPS18CQ9Y3D5 142 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-257ENST00000638009 SAP30O75446 220 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 S4R3C0 116 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 KLF5Q13887 457 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 WFDC9Q8NEX5 89 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 K7EP13 123 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 SCRT2Q9NQ03 307 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 K7EMI3 77 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 CEACAM1P13688 526 aa15.98■□□□□ 0.15
CACNA1A-257ENST00000638009 TMEM52Q8NDY8 209 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 FAM231BA6NCW3 169 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 IGHV3-11P01762 117 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 ZNF474Q6S9Z5 364 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 MRPL55Q7Z7F7 128 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 CRIM1Q9NZV1 1036 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 DTX4Q9Y2E6 619 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 TAL2Q16559 108 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 SCRT1Q9BWW7 348 aa15.97■□□□□ 0.15
CACNA1A-257ENST00000638009 IGHV2OR16-5A0A0B4J2B6 119 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 LINC01551Q86U37 167 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 LILRA6Q6PI73 481 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 LYZL1Q6UWQ5 148 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 TRAV12-1A0A0B4J245 112 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 TMEM75Q8N9X5 138 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 PLA2G2FQ9BZM2 168 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 ORMDL1Q9P0S3 153 aa15.96■□□□□ 0.15
CACNA1A-257ENST00000638009 CECR9P0C854 216 aa15.96■□□□□ 0.14
CACNA1A-257ENST00000638009 PYYP10082 97 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 FAM104BQ5XKR9 115 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 ZNF319Q9P2F9 582 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 IGHV3OR16-10A0A075B7F0 116 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 CCL3L1P16619 93 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 GAS1P54826 345 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 TMEM243Q9BU79 118 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 SRXN1Q9BYN0 137 aa15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 RNASE6Q93091 150 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-257ENST00000638009 CRYBA2P53672 197 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 ANKHD1Q8IWZ3 2542 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 SPANXB1Q9NS25 103 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 A0A1W2PPM0 123 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 COX6A1P12074 109 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 FOXL2P58012 376 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 HERVK_113P63121 156 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 TSSC4Q9Y5U2 329 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 SMRP1Q8NCR6 262 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 A0A1B0GTI1 187 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 AZU1P20160 251 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 IGKV2-40A0A087WW87 121 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 IGKV2D-40P01614 121 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 LCN12Q6JVE5 192 aa15.94■□□□□ 0.14
CACNA1A-257ENST00000638009 Q5BKY6 102 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 A0A0A6YYD4 124 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 PPIFP30405 207 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 RNF222A6NCQ9 220 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 A8MWP6 167 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 ATP5G1P05496 136 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 CGB7P0DN87 165 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 A0A1B0GX51 115 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 CTSBP07858 339 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 PEBP1P30086 187 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 LRRK2Q5S007 2527 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 LIMS2Q7Z4I7 341 aa15.93■□□□□ 0.14
CACNA1A-257ENST00000638009 CEND1Q8N111 149 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 RNF126Q9BV68 326 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 IGHV3-73A0A0B4J1V6 119 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 K7EP34 96 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 VSIRQ9H7M9 311 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 COL5A3P25940 1745 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 SH2D1AO60880 128 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 CRYBA4P53673 196 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 MORN5Q5VZ52 161 aa15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 C14orf178Q8N769 122 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-257ENST00000638009 C20orf144Q9BQM9 153 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms