RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SH2D7A6NKC9 451 aaPredicted RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 ZNF785A8K8V0 405 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 TGFAP01135 160 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 IGLV1-40P01703 118 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 TRGV3P03979 118 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 IGHV4-31P0DP07 118 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 S100A2P29034 98 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 GPR183P32249 361 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 IER3P46695 156 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 CSN1S1P47710 185 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 BLCAPP62952 87 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 Q0VG73 95 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 LY6EQ16553 131 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 PSG3Q16557 428 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 LINC00322Q6ZN03 302 aaPredicted RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 GOLT1AQ6ZVE7 132 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 ATP5L2Q7Z4Y8 100 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 Q86TA4 180 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 NHLRC2Q8NBF2 726 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 NUP35Q8NFH5 326 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 OR4B1Q8NGF8 309 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 OR5R1Q8NH85 324 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 MS4A10Q96PG2 267 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 GPR61Q9BZJ8 451 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 MRPL18Q9H0U6 180 aaKnown RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 CLEC5AQ9NY25 188 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 NAT8BQ9UHF3 227 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 PSG8Q9UQ74 426 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 ZFYVE26Q68DK2 2539 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 UTP20O75691 2785 aaKnown RBP4.29□□□□□ -1.72
NEK3-211ENST00000629912 A0A0G2JLM5 398 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 RNF223E7ERA6 249 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 NDUFA4O00483 81 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 P01737 135 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 IGHG4P01861 327 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 HLA-DQA1P01909 254 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 FRMD6-AS1P0C7T7 363 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 ESDP10768 282 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 CBLN1P23435 193 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 S100A12P80511 92 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 CFHR3Q02985 330 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 DEFB112Q30KQ8 113 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 FAM209BQ5JX69 171 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 SAPCD1Q5SSQ6 148 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 LCN12Q6JVE5 192 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 Q6YL49 198 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 MRPL53Q96EL3 112 aaKnown RBP4.29□□□□□ -1.72
NEK3-211ENST00000629912 SGK494Q96LW2 274 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 METTL26Q96S19 204 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 HIST1H2BLQ99880 126 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 ZNF331Q9NQX6 463 aaPredicted RBP4.29□□□□□ -1.72
NEK3-211ENST00000629912 RPH3ALQ9UNE2 315 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 ANKRD17O75179 2603 aaKnown RBP4.29□□□□□ -1.72
NEK3-211ENST00000629912 FAM208BQ5VWN6 2430 aa4.29□□□□□ -1.72
NEK3-211ENST00000629912 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 A0A1B0GXF2 115 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 RBAKDNA6NC62 111 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 A8MWP6 167 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 SNURFLB1AK76 121 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 K7EMT4 169 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 M0R3E3 92 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CA1P00915 261 aaPredicted RBP4.28□□□□□ -1.72
NEK3-211ENST00000629912 AMBPP02760 352 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CRISP2P16562 243 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 COL8A1P27658 744 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CRIP1P50238 77 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 TCL1AP56279 114 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 TPPP2P59282 170 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 PAFAH1B2P68402 229 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 SRSF2Q01130 221 aaKnown RBP4.28□□□□□ -1.72
NEK3-211ENST00000629912 OR10J3Q5JRS4 329 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 Q5PR19 223 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CYB5R2Q6BCY4 276 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 RBPMS2Q6ZRY4 209 aaKnown RBP4.28□□□□□ -1.72
NEK3-211ENST00000629912 Q6ZS46 218 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CIARTQ8N365 385 aaPredicted RBP4.28□□□□□ -1.72
NEK3-211ENST00000629912 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 TMEM18Q96B42 140 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 ZC2HC1AQ96GY0 325 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 PACRGQ96M98 296 aaPredicted RBP4.28□□□□□ -1.72
NEK3-211ENST00000629912 NEU1Q99519 415 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 SLC50A1Q9BRV3 221 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 PPP1R14DQ9NXH3 145 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 LINC00527Q9UJ94 153 aa4.28□□□□□ -1.72
NEK3-211ENST00000629912 CRYBG3Q68DQ2 2970 aa4.27□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3-35A0A0C4DH35 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms