RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MAP1LC3BQ9GZQ8 125 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 H3BQ15 152 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 CXorf1O96002 111 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 IFNA7P01567 189 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 GUK1Q16774 197 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 SAMD13Q5VXD3 122 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 LCN15Q6UWW0 184 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 GBGT1Q8N5D6 347 aa14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 PRKDCP78527 4128 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-221ENST00000622702 OR4C46A6NHA9 309 aa14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 DNASE2O00115 360 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 H2AFB1P0C5Y9 115 aa14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 UBE2L3P68036 154 aaKnown RBP14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 GUCA2BQ16661 112 aa14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF586Q9NXT0 402 aa14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF256Q9Y2P7 627 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF705EA8MWA4 302 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 K7EQG2 157 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 SOCS3O14543 225 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 OR10J4P0C629 311 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 NBEAP1P0C6P0 100 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 GCHFRP30047 84 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 SUN5Q8TC36 379 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 SFT2D1Q8WV19 159 aa14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 SAT2Q96F10 170 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-221ENST00000622702 TRBV19A0A075B6N1 114 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 TRAV1-1A0A0B4J248 108 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF253O75346 499 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 TFPI2P48307 235 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 PDE6HQ13956 83 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 LRRC20Q8TCA0 184 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 TMEM167BQ9NRX6 74 aa14.83□□□□□ -0.03
PDLIM2-221ENST00000622702 SNRPCP09234 159 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 FGF8P55075 233 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 WFDC3Q8IUB2 231 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 UBQLN2Q9UHD9 624 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 ISLRO14498 428 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 BLOC1S1P78537 153 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 PRR25Q96S07 402 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 SLC50A1Q9BRV3 221 aa14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 ZNF331Q9NQX6 463 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-221ENST00000622702 H3BTX0 84 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 K7EIL1 84 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 SLC17A3O00476 420 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 NDUFB4O95168 129 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 HBE1P02100 147 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 IFITM2Q01629 132 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 MRAPQ8TCY5 172 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 BLNKQ8WV28 456 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 C16orf92Q96LL3 132 aa14.81□□□□□ -0.04
PDLIM2-221ENST00000622702 TRAV8-2A0A0B4J237 113 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 TEX46H3BTG2 121 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 ID1P41134 155 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 PSMB3P49720 205 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 IQCF2Q8IXL9 164 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 FAM24BQ8N5W8 94 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 TMPRSS5Q9H3S3 457 aa14.8□□□□□ -0.04
PDLIM2-221ENST00000622702 SNRPD3P62318 126 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-221ENST00000622702 PSG9Q00887 426 aa14.79□□□□□ -0.04
PDLIM2-221ENST00000622702 ZNF767PQ75MW2 155 aa14.79□□□□□ -0.04
PDLIM2-221ENST00000622702 FAM110AQ9BQ89 295 aa14.79□□□□□ -0.04
PDLIM2-221ENST00000622702 CLEC5AQ9NY25 188 aa14.79□□□□□ -0.04
PDLIM2-221ENST00000622702 CMC4P56277 68 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-221ENST00000622702 LYPD1Q8N2G4 141 aa14.78□□□□□ -0.04
PDLIM2-221ENST00000622702 LYPD6BQ8NI32 183 aa14.78□□□□□ -0.04
PDLIM2-221ENST00000622702 A0A1B0GV50 99 aa14.77□□□□□ -0.04
PDLIM2-221ENST00000622702 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
PDLIM2-221ENST00000622702 ODF3L2Q3SX64 289 aa14.77□□□□□ -0.04
PDLIM2-221ENST00000622702 DEFB121Q5J5C9 76 aa14.77□□□□□ -0.04
PDLIM2-221ENST00000622702 CD7P09564 240 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 RANP62826 216 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 GTSCR1Q86UQ5 136 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 MAP6D1Q9H9H5 199 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 C19orf73Q9NVV2 129 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 A0A1W2PRE2 83 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 NMBP08949 121 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 PPT1P50897 306 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 CD81P60033 236 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 CCL20P78556 96 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 PMS2P11Q13670 270 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 IGFL4Q6B9Z1 124 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 C20orf173Q96LM9 149 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 Q9H3A6 140 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 AAMDCQ9H7C9 122 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 ARL2-SNX15V9GYD0 113 aa14.76□□□□□ -0.05
PDLIM2-221ENST00000622702 PSG3Q16557 428 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 PSMG4Q5JS54 123 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 RNF182Q8N6D2 247 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 MRPL53Q96EL3 112 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 LINC00052Q96N35 136 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 OTORQ9NRC9 128 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 PRELID1Q9Y255 219 aa14.75□□□□□ -0.05
PDLIM2-221ENST00000622702 OR11H12B2RN74 326 aa14.74□□□□□ -0.05
PDLIM2-221ENST00000622702 HLA-DMBP28068 263 aa14.74□□□□□ -0.05
PDLIM2-221ENST00000622702 DEFB131AP59861 70 aa14.74□□□□□ -0.05
PDLIM2-221ENST00000622702 ICAM4Q14773 271 aa14.74□□□□□ -0.05
PDLIM2-221ENST00000622702 EXOC3-AS1Q8N2X6 119 aa14.74□□□□□ -0.05
PDLIM2-221ENST00000622702 TGP01266 2768 aa14.73□□□□□ -0.05
PDLIM2-221ENST00000622702 FAM74A7A6NL05 159 aa14.73□□□□□ -0.05
PDLIM2-221ENST00000622702 Q8N1Y9 231 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms