RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 TRAV8-6A0A0B4J262 113 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 RNASE6Q93091 150 aaKnown RBP12.48□□□□□ -0.41
NPHP4-211ENST00000622020 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 TEX22C9J3V5 150 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 SMKR1H3BMG3 65 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 IGKV1-17P01599 117 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 PPBPP02775 128 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 PSG9Q00887 426 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 LY6HO94772 140 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 DLX6P56179 175 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 SMIM15Q7Z3B0 74 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 RPEQ96AT9 228 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 NGBQ9NPG2 151 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 ZNF292O60281 2723 aa12.48□□□□□ -0.41
NPHP4-211ENST00000622020 D6R8Y8 96 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 HAX1O00165 279 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 GPR183P32249 361 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 RIPPLY3P57055 190 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 CT83Q5H943 113 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 NHLH1Q02575 133 aa12.47□□□□□ -0.41
NPHP4-211ENST00000622020 PET117Q6UWS5 81 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 PRSS57Q6UWY2 283 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 Q6ZS92 163 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 FAM57AQ8TBR7 257 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
NPHP4-211ENST00000622020 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-211ENST00000622020 NPIPB6E9PJ23 425 aa12.46□□□□□ -0.42
NPHP4-211ENST00000622020 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.42
NPHP4-211ENST00000622020 LINC00311Q8N616 119 aa12.46□□□□□ -0.42
NPHP4-211ENST00000622020 RAB37Q96AX2 223 aa12.46□□□□□ -0.42
NPHP4-211ENST00000622020 SMIM12Q96EX1 92 aa12.46□□□□□ -0.42
NPHP4-211ENST00000622020 TRBV19A0A075B6N1 114 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 SAP30O75446 220 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 RIGQ13278 110 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 TM4SF20Q53R12 229 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 I3L2K1 104 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 OVOL3O00110 214 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 Q8TAT8 98 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 ONECUT1Q9UBC0 465 aa12.45□□□□□ -0.42
NPHP4-211ENST00000622020 C7orf71A4D174 169 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 E7EQL1 145 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 CEACAM4O75871 244 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 RHOGP84095 191 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 HES1Q14469 280 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 PIP4P1Q86T03 277 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-211ENST00000622020 PRRG2O14669 202 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-211ENST00000622020 CACNG7P62955 275 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
NPHP4-211ENST00000622020 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 CSN1S1P47710 185 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 C3orf36Q3SXR2 165 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 LINC01545Q5VT33 79 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 SIGLEC15Q6ZMC9 328 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 C2orf91Q6ZV80 131 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 SCNM1Q9BWG6 230 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
NPHP4-211ENST00000622020 TNFRSF13BO14836 293 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-211ENST00000622020 TIMM23O14925 209 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 CRYGBP07316 175 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 CT45A10P0DMU9 189 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 HIST1H1AQ02539 215 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-211ENST00000622020 PSG3Q16557 428 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-211ENST00000622020 TMEM75Q8N9X5 138 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 MEGF9Q9H1U4 602 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 SIGLEC8Q9NYZ4 499 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 THYN1Q9P016 225 aa12.43□□□□□ -0.42
NPHP4-211ENST00000622020 RALYQ9UKM9 306 aaKnown RBP12.43□□□□□ -0.42
NPHP4-211ENST00000622020 K7EIM0 57 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 NMUP48645 174 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 A0A096LNJ9 63 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 PPIAL4CA0A0B4J2A2 164 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 K7EQM0 130 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 PPIAL4GP0DN37 164 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 PLP1P60201 277 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 FAM71F2Q6NXP2 309 aa12.42□□□□□ -0.42
NPHP4-211ENST00000622020 FAM231BA6NCW3 169 aa12.41□□□□□ -0.42
NPHP4-211ENST00000622020 COX8AP10176 69 aa12.41□□□□□ -0.42
NPHP4-211ENST00000622020 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms