RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FAM90A10PA6NDY2 464 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 FAM90A7PA6NKC0 464 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 IGLV3-21P80748 117 aaPredicted RBP7□□□□□ -1.29
COMMD3-215ENST00000602574 PAX8Q06710 450 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 TWIST1Q15672 202 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 TMEM155Q4W5P6 130 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
COMMD3-215ENST00000602574 CALYQ9NYX4 217 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF492Q9P255 531 aa7□□□□□ -1.29
COMMD3-215ENST00000602574 CACNA1IQ9P0X4 2223 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 WI2-2373I1.2A0A1W2PRP0 233 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 CXCL13O43927 109 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 IGKV1-5P01602 117 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 AAMDCQ9H7C9 122 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 CGB1A6NKQ9 187 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 H3BT86 120 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 IGLV3-1P01715 115 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 MYCNOSP40205 109 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 NPC2P61916 151 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 PCOLCEQ15113 449 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-215ENST00000602574 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
COMMD3-215ENST00000602574 FREM3P0C091 2139 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 SPTBP11277 2137 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 PGPA6NDG6 321 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 LINC01546A6NGU7 62 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 IGKV1-39P01597 117 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 IGKV1D-39P04432 117 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF816Q0VGE8 651 aaPredicted RBP6.98□□□□□ -1.29
COMMD3-215ENST00000602574 CDSNQ15517 529 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 SERP2Q8N6R1 65 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 Q96MF0 132 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 RPP21Q9H633 154 aaKnown RBP6.98□□□□□ -1.29
COMMD3-215ENST00000602574 RAI1Q7Z5J4 1906 aaPredicted RBP6.98□□□□□ -1.29
COMMD3-215ENST00000602574 FAM90A22PA8MWA6 464 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 FAM90A12PA8MX19 464 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 FOXS1O43638 330 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 DEFA4P12838 97 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 PLA2G5P39877 138 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 LY6G5CQ5SRR4 150 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 GPHA2Q96T91 129 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 PLEKHA3Q9HB20 300 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
COMMD3-215ENST00000602574 COL5A1P20908 1838 aaPredicted RBP6.97□□□□□ -1.29
COMMD3-215ENST00000602574 A0A1W2PQD3 144 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 LMO7DNF2Z398 122 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 PEX7O00628 323 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 EDDM3BP56851 147 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 C3orf36Q3SXR2 165 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 CCL28Q9NRJ3 127 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 U3KQK5 164 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 MYOFQ9NZM1 2061 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 MRPS12O15235 138 aaKnown RBP6.97□□□□□ -1.29
COMMD3-215ENST00000602574 AVPP01185 164 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 ELANEP08246 267 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 P0C879 139 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 HOXB4P17483 251 aaPredicted RBP6.97□□□□□ -1.29
COMMD3-215ENST00000602574 ZNF138P52744 262 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 FAM201AQ5SY85 155 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 HCSTQ9UBK5 93 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
COMMD3-215ENST00000602574 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 A0A1W2PRU2 124 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 NCBP2LA6PVI3 153 aaKnown RBP6.96□□□□□ -1.3
COMMD3-215ENST00000602574 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.3
COMMD3-215ENST00000602574 UPK2O00526 184 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 IGKV1D-16P01601 117 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 GFERP55789 205 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
COMMD3-215ENST00000602574 ATXN8Q156A1 80 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 NDUFA11Q86Y39 141 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 MYO9BQ13459 2157 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 LTBP2Q14767 1821 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 TRGV5A0A0B4J1U4 118 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 DLX1P56177 255 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 DEFB134Q4QY38 66 aa6.96□□□□□ -1.3
COMMD3-215ENST00000602574 RPUSD1Q9UJJ7 312 aaKnown RBP6.96□□□□□ -1.3
COMMD3-215ENST00000602574 MPDZO75970 2070 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 NPIPB11E5RHQ5 1161 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 ASPHD1Q5U4P2 390 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 MRPL14Q6P1L8 145 aaKnown RBP6.95□□□□□ -1.3
COMMD3-215ENST00000602574 Q6ZRU5 148 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 MAPKAPK5-AS1Q8N8E1 139 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 FOXB1Q99853 325 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 ZNF442Q9H7R0 627 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 DEPPQ9NTK1 212 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 ADAMTS9Q9P2N4 1935 aa6.95□□□□□ -1.3
COMMD3-215ENST00000602574 A0A0G2JNJ9 132 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 INS-IGF2F8WCM5 200 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 K7EMI3 77 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms